C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: caspase 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028914 Casp9 10090 + 4:141793612-141815976 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030747 Casp9-001 141793612-141815976 protein_coding
  ENSMUST00000097805 Casp9-003 141793612-141813687 protein_coding
  ENSMUST00000124161 Casp9-006 141814758-141815976 processed_transcript
  ENSMUST00000128660 Casp9-002 141793612-141798086 processed_transcript
  ENSMUST00000138359 Casp9-005 141793844-141796574 processed_transcript
  ENSMUST00000153094 Casp9-004 141793710-141805442 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030747ENSMUST00000097805ENSMUST00000153094
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030747 7.537±0.65 9.420±0.83 7.003±0.15 7.483±3.28 8.758±1.59 9.958±0.38 3.627±0.98 10.497±0.39 6.399±0.92 9.696±0.14 0.846±0.42 11.195±2.71 7.481±3.54 3.396±1.65
ENSMUST00000097805 N/A 3.514±0.29 N/A 6.656±0.00 N/A N/A N/A N/A N/A N/A N/A 5.405±0.00 4.102±0.00 N/A
ENSMUST00000153094 N/A 6.789±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.346±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QM CIL_0007QM_0002 VISTA 4:141236761-141837859

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004197 IDA cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 IDA cytosol
GO:0006508 RCA proteolysis
GO:0006915 IDA apoptotic process
GO:0006919 IMP activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007568 IEA aging
GO:0008233 RCA peptidase activity
GO:0008630 ISS intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009411 IMP response to UV
GO:0014070 IEA response to organic cyclic compound
GO:0017124 ISS SH3 domain binding
GO:0019901 ISS protein kinase binding
GO:0032025 IEA response to cobalt ion
GO:0032355 IEA response to estradiol
GO:0032496 IEA response to lipopolysaccharide
GO:0034349 IEA glial cell apoptotic process
GO:0034644 ISS cellular response to UV
GO:0042770 ISS signal transduction in response to DNA damage
GO:0043065 IEA positive regulation of apoptotic process
GO:0043293 IEA apoptosome
GO:0043525 IMP positive regulation of neuron apoptotic process
GO:0046677 IEA response to antibiotic
GO:0071407 IEA cellular response to organic cyclic compound
GO:0071549 IDA cellular response to dexamethasone stimulus
GO:2001020 ISS regulation of response to DNA damage stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004325 casp9 caspase 9, apoptosis-related cysteine protease protein_coding Danio_rerio
ENSG00000132906 CASP9 caspase 9, apoptosis-related cysteine peptidase protein_coding Homo_sapiens

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