C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caspase 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097805 Casp9-003 ENSMUSG00000028914 10090 + 4:141793612-141813687 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaENSMUST00000097805
Transcript ID Adrenal Brain Ovary Placenta
ENSMUST00000097805 3.514±0.29 6.656±0.00 5.405±0.00 4.102±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QM CIL_0007QM_0002 VISTA 4:141236761-141837859

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004197 IDA cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006508 RCA proteolysis
GO:0006915 IDA apoptotic process
GO:0006919 IMP activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0008233 RCA peptidase activity
GO:0008630 IBA intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009411 IMP response to UV
GO:0043525 IMP positive regulation of neuron apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333868 CASP9-001 protein_coding Homo_sapiens 0 619
ENST00000348549 CASP9-002 protein_coding Homo_sapiens 0 259
ENST00000375890 CASP9-008 protein_coding Homo_sapiens 0 619
ENST00000400777 CASP9-006 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000424908 CASP9-007 protein_coding Homo_sapiens 0 388
ENST00000440484 CASP9-005 protein_coding Homo_sapiens 0 259
ENST00000447522 CASP9-003 protein_coding Homo_sapiens 0 614
ENST00000469637 CASP9-004 protein_coding Homo_sapiens 1e-35 154
ENST00000474305 CASP9-011 nonsense_mediated_decay Homo_sapiens 0 556
ENST00000546424 CASP9-009 protein_coding Homo_sapiens 0 619
ENST00000546969 CASP9-012 retained_intron Homo_sapiens 0 259

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