C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: zinc finger and BTB domain containing 48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155389 Zbtb48-001 ENSMUSG00000028952 10090 - 4:152019774-152027661 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleOvaryENSMUST00000155389
Transcript ID Heart Muscle Ovary
ENSMUST00000155389 0.283±0.00 0.183±0.00 1.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MT CIL_0003MT_0002 CGP 4:152008803-152027671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377674 ZBTB48-001 protein_coding Homo_sapiens 0 1249
ENST00000466813 ZBTB48-007 nonsense_mediated_decay Homo_sapiens 0 880
ENST00000466941 ZBTB48-008 retained_intron Homo_sapiens 0 446
ENST00000482360 ZBTB48-002 retained_intron Homo_sapiens 0 1009
ENST00000488936 ZBTB48-006 protein_coding Homo_sapiens 0 662
ENST00000498342 ZBTB48-003 retained_intron Homo_sapiens 0 381
ENST00000619514 ZBTB48-201 protein_coding Homo_sapiens 0 381

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