C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and BTB domain containing 48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066715 Zbtb48-009 ENSMUSG00000028952 10090 - 4:152019774-152027661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066715 1.931±0.21 2.335±0.62 1.463±0.22 2.235±0.47 2.023±0.49 2.576±0.34 0.731±0.31 1.725±0.54 2.279±0.96 2.911±0.45 0.704±0.29 2.652±1.38 2.484±0.95 2.470±1.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MT CIL_0003MT_0002 CGP 4:152008803-152027671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377674 ZBTB48-001 protein_coding Homo_sapiens 0 2281
ENST00000466813 ZBTB48-007 nonsense_mediated_decay Homo_sapiens 0 905
ENST00000466941 ZBTB48-008 retained_intron Homo_sapiens 0 446
ENST00000482360 ZBTB48-002 retained_intron Homo_sapiens 0 1286
ENST00000488936 ZBTB48-006 protein_coding Homo_sapiens 0 911
ENST00000498342 ZBTB48-003 retained_intron Homo_sapiens 0 505
ENST00000619514 ZBTB48-201 protein_coding Homo_sapiens 0 505

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