C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: castor zinc finger 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028977 Casz1 10090 + 4:148804429-148954889 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094464 Casz1-001 148804429-148945129 protein_coding
  ENSMUST00000122222 Casz1-004 148804429-148954889 protein_coding
  ENSMUST00000128881 Casz1-005 148804465-148839746 processed_transcript
  ENSMUST00000139806 Casz1-006 148933114-148940511 protein_coding
  ENSMUST00000140617 Casz1-002 148889381-148891936 processed_transcript
  ENSMUST00000147270 Casz1-003 148901149-148932896 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094464ENSMUST00000122222ENSMUST00000139806ENSMUST00000147270
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094464 N/A N/A N/A N/A N/A 6.247±0.00 1.670±0.20 0.856±0.05 0.079±0.04 N/A 2.094±0.31 N/A 0.314±0.01 1.456±0.45
ENSMUST00000122222 3.682±1.15 1.782±0.63 8.939±0.72 1.161±0.92 4.237±2.61 16.674±5.02 3.467±1.31 2.586±0.35 0.153±0.10 21.021±3.14 2.482±1.32 3.837±1.53 1.288±0.62 2.050±1.02
ENSMUST00000139806 N/A N/A N/A N/A 1.527±0.91 N/A N/A 1.674±0.20 0.087±0.05 N/A N/A 1.599±0.28 0.599±0.01 N/A
ENSMUST00000147270 N/A N/A N/A N/A N/A N/A N/A N/A 0.287±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JY CIL_0008JY_0002 VISTA 4:148408124-149009196
CIL_0008JG CIL_0008JG_0002 VISTA 4:148444314-149044861
CIL_0008RU CIL_0008RU_0002 VISTA 4:148508781-149109416
CIL_0008S2 CIL_0008S2_0002 VISTA 4:148555953-149160332
CIL_00082Y CIL_00082Y_0002 VISTA 4:148576108-149176659
CIL_00085P CIL_00085P_0002 VISTA 4:148597228-149198219
CIL_0007WE CIL_0007WE_0002 VISTA 4:148621504-149222572
CIL_0007N5 CIL_0007N5_0002 UCNEbase 4:148708448-149061992
CIL_0008IM CIL_0008IM_0002 VISTA 4:148744049-149345133

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037030 casz1 castor zinc finger 1 protein_coding Danio_rerio
ENSG00000130940 CASZ1 castor zinc finger 1 protein_coding Homo_sapiens

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