C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: castor zinc finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122222 Casz1-004 ENSMUSG00000028977 10090 + 4:148804429-148954889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122222
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122222 3.682±1.15 1.782±0.63 8.939±0.72 1.161±0.92 4.237±2.61 16.674±5.02 3.467±1.31 2.586±0.35 0.153±0.10 21.021±3.14 2.482±1.32 3.837±1.53 1.288±0.62 2.050±1.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JY CIL_0008JY_0002 VISTA 4:148408124-149009196
CIL_0008JG CIL_0008JG_0002 VISTA 4:148444314-149044861
CIL_0008RU CIL_0008RU_0002 VISTA 4:148508781-149109416
CIL_0008S2 CIL_0008S2_0002 VISTA 4:148555953-149160332
CIL_00082Y CIL_00082Y_0002 VISTA 4:148576108-149176659
CIL_00085P CIL_00085P_0002 VISTA 4:148597228-149198219
CIL_0007WE CIL_0007WE_0002 VISTA 4:148621504-149222572
CIL_0007N5 CIL_0007N5_0002 UCNEbase 4:148708448-149061992
CIL_0008IM CIL_0008IM_0002 VISTA 4:148744049-149345133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000002812 casz1-201 protein_coding Danio_rerio 0 1081
ENSDART00000148257 casz1-001 protein_coding Danio_rerio 0 826
ENST00000344008 CASZ1-001 protein_coding Homo_sapiens 0 4388
ENST00000377022 CASZ1-003 protein_coding Homo_sapiens 0 6252
ENST00000447850 CASZ1-009 protein_coding Homo_sapiens 0 542
ENST00000478524 CASZ1-004 processed_transcript Homo_sapiens 0.00000000000009 81
ENST00000478728 CASZ1-006 processed_transcript Homo_sapiens 0 503
ENST00000490176 CASZ1-005 retained_intron Homo_sapiens 0 228
ENST00000492173 CASZ1-002 retained_intron Homo_sapiens 0 1142
ENST00000496432 CASZ1-007 retained_intron Homo_sapiens 0 3192

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