C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: castor zinc finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139806 Casz1-006 ENSMUSG00000028977 10090 + 4:148933114-148940511 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverOvaryPlacentaENSMUST00000139806
Transcript ID Breast Kidney Liver Ovary Placenta
ENSMUST00000139806 1.527±0.91 1.674±0.20 0.087±0.05 1.599±0.28 0.599±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JY CIL_0008JY_0002 VISTA 4:148408124-149009196
CIL_0008JG CIL_0008JG_0002 VISTA 4:148444314-149044861
CIL_0008RU CIL_0008RU_0002 VISTA 4:148508781-149109416
CIL_0008S2 CIL_0008S2_0002 VISTA 4:148555953-149160332
CIL_00082Y CIL_00082Y_0002 VISTA 4:148576108-149176659
CIL_00085P CIL_00085P_0002 VISTA 4:148597228-149198219
CIL_0007WE CIL_0007WE_0002 VISTA 4:148621504-149222572
CIL_0007N5 CIL_0007N5_0002 UCNEbase 4:148708448-149061992
CIL_0008IM CIL_0008IM_0002 VISTA 4:148744049-149345133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000002812 casz1-201 protein_coding Danio_rerio 0 826
ENSDART00000148257 casz1-001 protein_coding Danio_rerio 0 826
ENST00000344008 CASZ1-001 protein_coding Homo_sapiens 0 2314
ENST00000377022 CASZ1-003 protein_coding Homo_sapiens 0 2314
ENST00000492173 CASZ1-002 retained_intron Homo_sapiens 0 761
ENST00000496432 CASZ1-007 retained_intron Homo_sapiens 0 2350

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