C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and BTB domain containing 49
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114113 Zbtb49-007 ENSMUSG00000029127 10090 - 5:38212037-38220454 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000114113
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000114113 0.712±0.00 0.224±0.00 1.195±0.00 0.293±0.08 0.273±0.08 1.161±0.01 0.081±0.02 1.502±0.41 0.543±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000969 CIL_000969_0002 VISTA 5:37601106-38202493
CIL_00096C CIL_00096C_0002 VISTA 5:37617742-38218594
CIL_00096B CIL_00096B_0002 VISTA 5:37667623-38269196
CIL_0008QQ CIL_0008QQ_0002 VISTA 5:37760247-38361421
CIL_00096M CIL_00096M_0002 VISTA 5:37765055-38366694
CIL_0008ZA CIL_0008ZA_0002 VISTA 5:37806142-38406996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337872 ZBTB49-001 protein_coding Homo_sapiens 0 424
ENST00000502918 ZBTB49-004 protein_coding Homo_sapiens 0 401
ENST00000515012 ZBTB49-006 nonsense_mediated_decay Homo_sapiens 0 424

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