C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 32
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029130 Rnf32 10090 + 5:29195992-29225524 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001247 Rnf32-002 29195997-29225522 protein_coding
  ENSMUST00000159272 Rnf32-008 29195995-29198747 protein_coding
  ENSMUST00000160051 Rnf32-006 29196084-29197991 processed_transcript
  ENSMUST00000160246 Rnf32-001 29196006-29225524 protein_coding
  ENSMUST00000160383 Rnf32-003 29195993-29225481 nonsense_mediated_decay
  ENSMUST00000160887 Rnf32-005 29196058-29207651 retained_intron
  ENSMUST00000160888 Rnf32-009 29195992-29203135 protein_coding
  ENSMUST00000161398 Rnf32-007 29196003-29203195 protein_coding
  ENSMUST00000162975 Rnf32-010 29198671-29225301 protein_coding
  ENSMUST00000163050 Rnf32-004 29196055-29225485 nonsense_mediated_decay
  ENSMUST00000168460 Rnf32-201 29198006-29225291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001247ENSMUST00000159272ENSMUST00000160051ENSMUST00000160246ENSMUST00000160383ENSMUST00000160887ENSMUST00000160888ENSMUST00000161398ENSMUST00000162975ENSMUST00000163050ENSMUST00000168460
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001247 0.222±0.00 N/A 0.708±0.00 2.424±0.08 N/A N/A N/A 0.107±0.00 0.043±0.00 0.172±0.00 N/A 0.273±0.00 0.136±0.00 82.812±8.24
ENSMUST00000159272 N/A N/A N/A N/A N/A N/A N/A N/A 0.231±0.04 N/A N/A 1.249±0.00 0.662±0.00 N/A
ENSMUST00000160051 N/A N/A N/A N/A 0.246±0.06 1.984±0.48 N/A N/A N/A N/A N/A 0.985±0.00 N/A N/A
ENSMUST00000160246 N/A N/A N/A 0.818±0.00 N/A 0.546±0.00 N/A N/A 0.080±0.03 N/A 0.131±0.04 1.771±0.00 0.187±0.16 19.279±0.00
ENSMUST00000160383 0.086±0.00 0.422±0.00 0.361±0.00 1.856±0.00 0.111±0.00 N/A 0.122±0.04 0.244±0.12 0.053±0.03 0.346±0.22 0.209±0.00 0.744±0.22 0.111±0.00 N/A
ENSMUST00000160887 0.099±0.07 N/A N/A 0.509±0.16 0.103±0.01 0.685±0.06 0.087±0.06 0.135±0.04 0.062±0.03 0.212±0.04 0.104±0.05 0.394±0.10 0.081±0.00 N/A
ENSMUST00000160888 N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.03 N/A 0.096±0.00 0.651±0.15 0.194±0.00 N/A
ENSMUST00000161398 N/A N/A N/A N/A N/A N/A N/A 0.503±0.01 N/A N/A N/A N/A N/A N/A
ENSMUST00000162975 0.045±0.00 1.727±0.00 N/A N/A 0.208±0.00 N/A 0.045±0.00 0.366±0.02 0.094±0.00 N/A 0.092±0.00 0.858±0.36 N/A N/A
ENSMUST00000163050 N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A 0.071±0.00 0.463±0.00 0.276±0.10 N/A
ENSMUST00000168460 0.234±0.14 1.015±0.47 N/A 0.845±0.00 0.193±0.03 N/A N/A 0.286±0.10 0.095±0.01 0.515±0.13 0.158±0.15 1.134±0.51 0.239±0.09 38.097±7.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026H CIL_00026H_0002 CGP 5:28456815-29225524
CIL_000455 CIL_000455_0002 CGP 5:29195992-29378390

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005768 IEA endosome
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016235 ISA aggresome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060035 rnf32 ring finger protein 32 protein_coding Danio_rerio
ENSG00000105982 RNF32 ring finger protein 32 protein_coding Homo_sapiens

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