C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163050 Rnf32-004 ENSMUSG00000029130 10090 + 5:29196055-29225485 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleOvaryPlacentaENSMUST00000163050
Transcript ID Liver Muscle Ovary Placenta
ENSMUST00000163050 0.055±0.00 0.071±0.00 0.463±0.00 0.276±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026H CIL_00026H_0002 CGP 5:28456815-29225524
CIL_000455 CIL_000455_0002 CGP 5:29195992-29378390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016235 ISA aggresome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311822 RNF32-003 protein_coding Homo_sapiens 0 342
ENST00000317955 RNF32-001 protein_coding Homo_sapiens 0 342
ENST00000392741 RNF32-005 protein_coding Homo_sapiens 0 342
ENST00000392743 RNF32-201 protein_coding Homo_sapiens 0 342
ENST00000392747 RNF32-006 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000404282 RNF32-008 protein_coding Homo_sapiens 0 329
ENST00000405335 RNF32-004 protein_coding Homo_sapiens 0 342
ENST00000432459 RNF32-202 protein_coding Homo_sapiens 0 342
ENST00000463028 RNF32-013 processed_transcript Homo_sapiens 4e-39 165
ENST00000472537 RNF32-011 processed_transcript Homo_sapiens 8e-40 167
ENST00000480011 RNF32-010 processed_transcript Homo_sapiens 4e-39 165
ENST00000493999 RNF32-012 processed_transcript Homo_sapiens 0 339

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