C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001247 Rnf32-002 ENSMUSG00000029130 10090 + 5:29195997-29225522 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainKidneyLiverLungOvaryPlacentaTestisENSMUST00000001247
Transcript ID Adipose Bladder Brain Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000001247 0.222±0.00 0.708±0.00 2.424±0.08 0.107±0.00 0.043±0.00 0.172±0.00 0.273±0.00 0.136±0.00 82.812±8.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026H CIL_00026H_0002 CGP 5:28456815-29225524
CIL_000455 CIL_000455_0002 CGP 5:29195992-29378390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005768 IEA endosome
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016235 ISA aggresome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311822 RNF32-003 protein_coding Homo_sapiens 0 702
ENST00000317955 RNF32-001 protein_coding Homo_sapiens 0 832
ENST00000392741 RNF32-005 protein_coding Homo_sapiens 0 562
ENST00000392743 RNF32-201 protein_coding Homo_sapiens 0 832
ENST00000392747 RNF32-006 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000404282 RNF32-008 protein_coding Homo_sapiens 0 549
ENST00000405335 RNF32-004 protein_coding Homo_sapiens 0 832
ENST00000432459 RNF32-202 protein_coding Homo_sapiens 0 832
ENST00000463028 RNF32-013 processed_transcript Homo_sapiens 1e-38 163
ENST00000472537 RNF32-011 processed_transcript Homo_sapiens 8e-40 167
ENST00000480011 RNF32-010 processed_transcript Homo_sapiens 1e-38 163
ENST00000493999 RNF32-012 processed_transcript Homo_sapiens 0 339

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