C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: anaphase promoting complex subunit 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029176 Anapc4 10090 + 5:52834015-52867797 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031072 Anapc4-001 52834015-52867797 protein_coding
  ENSMUST00000130536 Anapc4-003 52842704-52848619 retained_intron
  ENSMUST00000131750 Anapc4-008 52861182-52862549 retained_intron
  ENSMUST00000138629 Anapc4-009 52865613-52866734 retained_intron
  ENSMUST00000141641 Anapc4-005 52847557-52848694 retained_intron
  ENSMUST00000142035 Anapc4-006 52850143-52859166 retained_intron
  ENSMUST00000144574 Anapc4-002 52834126-52866733 nonsense_mediated_decay
  ENSMUST00000145349 Anapc4-007 52860913-52865898 retained_intron
  ENSMUST00000150682 Anapc4-004 52843192-52848601 processed_transcript
  ENSMUST00000154980 Anapc4-010 52859059-52865996 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031072ENSMUST00000138629ENSMUST00000142035ENSMUST00000144574ENSMUST00000145349ENSMUST00000154980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031072 2.120±0.49 6.734±2.89 2.760±0.55 7.310±0.02 1.362±0.01 1.342±0.38 0.924±0.12 1.051±0.20 1.751±0.83 2.911±0.99 1.591±0.34 3.883±1.27 4.382±1.14 N/A
ENSMUST00000138629 N/A N/A 13.760±0.00 N/A N/A N/A N/A N/A 9.630±0.00 N/A N/A 26.742±0.00 N/A 8.306±0.00
ENSMUST00000142035 N/A N/A N/A 11.172±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 22.167±1.33 N/A
ENSMUST00000144574 6.225±1.74 9.209±2.93 10.362±1.14 13.354±5.10 4.450±2.74 6.169±2.54 3.752±1.12 4.074±0.42 4.755±2.88 8.149±3.35 7.391±0.85 9.358±3.92 17.921±3.93 3.636±0.47
ENSMUST00000145349 N/A N/A N/A N/A N/A 4.777±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154980 8.687±0.00 N/A N/A 16.225±4.30 11.460±3.92 7.153±0.41 5.293±1.37 6.662±1.36 4.348±0.34 12.112±1.36 N/A 18.781±2.87 21.544±2.11 6.050±2.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002F9 CIL_0002F9_0002 CGP 5:52775409-52867797
CIL_0002FA CIL_0002FA_0002 CGP 5:52834015-53071664

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005680 ISS anaphase-promoting complex
GO:0007067 IEA mitotic nuclear division
GO:0019903 IEA protein phosphatase binding
GO:0030071 IEA regulation of mitotic metaphase/anaphase transition
GO:0031145 IEA anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0070979 ISS protein K11-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032237 anapc4 anaphase promoting complex subunit 4 protein_coding Danio_rerio
ENSG00000053900 ANAPC4 anaphase promoting complex subunit 4 protein_coding Homo_sapiens

Loading