C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002FA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000053900-ENSG00000157765 CGP 9606 4:25377213-25678748
GeneTranscriptPositionBiotype
ENSG00000053900 (ANAPC4)
anaphase promoting complex subunit 4 		ENST00000315368 (ANAPC4-001) 25377213-25418498 protein_coding
ENST00000503805 (ANAPC4-010) 25394758-25409769 retained_intron
ENST00000504256 (ANAPC4-003) 25405601-25418498 retained_intron
ENST00000505080 (ANAPC4-008) 25377315-25390183 nonsense_mediated_decay
ENST00000505842 (ANAPC4-011) 25396719-25413871 retained_intron
ENST00000505991 (ANAPC4-006) 25377320-25388854 protein_coding
ENST00000506973 (ANAPC4-005) 25415152-25418497 retained_intron
ENST00000507809 (ANAPC4-007) 25377357-25380608 retained_intron
ENST00000507925 (ANAPC4-009) 25393861-25395420 retained_intron
ENST00000510092 (ANAPC4-002) 25377293-25418489 protein_coding
ENST00000515848 (ANAPC4-004) 25412918-25418261 retained_intron
ENSG00000157765 (SLC34A2)
solute carrier family 34 (type II sodium/phosphate contransporter), member 2 		ENST00000382051 (SLC34A2-001) 25655844-25678748 protein_coding
ENST00000503434 (SLC34A2-003) 25656464-25676749 protein_coding
ENST00000504570 (SLC34A2-002) 25655822-25676769 protein_coding
ENST00000507530 (SLC34A2-006) 25656469-25666231 protein_coding
ENST00000510033 (SLC34A2-007) 25664894-25669693 processed_transcript
ENST00000513204 (SLC34A2-005) 25655301-25666240 protein_coding
ENSG00000228154 (RP11-302F12.2)
 ENST00000506450 (RP11-302F12.2-001) 25622777-25623601 processed_pseudogene
ENSG00000248545 (RP11-302F12.3)
 ENST00000515188 (RP11-302F12.3-001) 25608711-25619468 lincRNA
ENSG00000248608 (RP11-206P5.2)
 ENST00000504166 (RP11-206P5.2-001) 25504997-25506675 processed_pseudogene
ENSG00000249320 (RP11-206P5.1)
 ENST00000513686 (RP11-206P5.1-001) 25472517-25473815 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0002FA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029176-ENSMUSG00000029188 CGP 10090 5:52834015-53071664
GeneTranscriptPositionBiotype
ENSMUSG00000029176 (Anapc4)
anaphase promoting complex subunit 4 		ENSMUST00000031072 (Anapc4-001) 52834015-52867797 protein_coding
ENSMUST00000130536 (Anapc4-003) 52842704-52848619 retained_intron
ENSMUST00000131750 (Anapc4-008) 52861182-52862549 retained_intron
ENSMUST00000138629 (Anapc4-009) 52865613-52866734 retained_intron
ENSMUST00000141641 (Anapc4-005) 52847557-52848694 retained_intron
ENSMUST00000142035 (Anapc4-006) 52850143-52859166 retained_intron
ENSMUST00000144574 (Anapc4-002) 52834126-52866733 nonsense_mediated_decay
ENSMUST00000145349 (Anapc4-007) 52860913-52865898 retained_intron
ENSMUST00000150682 (Anapc4-004) 52843192-52848601 processed_transcript
ENSMUST00000154980 (Anapc4-010) 52859059-52865996 retained_intron
ENSMUSG00000029188 (Slc34a2)
solute carrier family 34 (sodium phosphate), member 2 		ENSMUST00000094787 (Slc34a2-001) 53049353-53071664 protein_coding
ENSMUST00000147243 (Slc34a2-002) 53049353-53066300 retained_intron
ENSMUST00000168667 (Slc34a2-004) 53058156-53070772 protein_coding
ENSMUST00000170523 (Slc34a2-003) 53038082-53061401 protein_coding
ENSMUSG00000090642 (Gm17182)
predicted gene 17182 		ENSMUST00000163795 (Gm17182-001) 53047687-53049187 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FA_0001ENSG00000053900ENST00000315368ENST00000503805ENST00000504256ENST00000505080ENST00000505842ENST00000505991ENST00000506973ENST00000507809ENST00000507925ENST00000510092ENST00000515848ENSG00000157765ENST00000382051ENST00000503434ENST00000504570ENST00000507530ENST00000510033ENST00000513204ENSG00000228154ENST00000506450ENSG00000248545ENST00000515188ENSG00000248608ENST00000504166ENSG00000249320ENST00000513686CIL_0002FA_0002ENSMUSG00000029176ENSMUST00000031072ENSMUST00000130536ENSMUST00000131750ENSMUST00000138629ENSMUST00000141641ENSMUST00000142035ENSMUST00000144574ENSMUST00000145349ENSMUST00000150682ENSMUST00000154980ENSMUSG00000029188ENSMUST00000094787ENSMUST00000147243ENSMUST00000168667ENSMUST00000170523ENSMUSG00000090642ENSMUST00000163795
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FA_0001ENSG00000053900ENST00000315368ENST00000504256ENST00000505991ENST00000510092ENST00000515848ENSG00000157765ENST00000382051ENST00000503434ENST00000504570ENST00000510033ENST00000513204ENSG00000228154ENST00000506450ENSG00000248545ENST00000515188ENSG00000248608ENST00000504166ENSG00000249320ENST00000513686CIL_0002FA_0002ENSMUSG00000029176ENSMUST00000031072ENSMUST00000138629ENSMUST00000142035ENSMUST00000144574ENSMUST00000145349ENSMUST00000154980ENSMUSG00000029188ENSMUST00000094787ENSMUST00000147243ENSMUST00000168667ENSMUST00000170523ENSMUSG00000090642ENSMUST00000163795
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000053900 ENST00000315368 1.969±0.00 2.556±0.00 N/A 1.918±0.66 5.526±0.00 1.064±0.00 0.930±0.00 N/A 2.031±0.30 1.769±0.00 N/A 8.157±0.00 3.060±0.47 4.659±0.00
ENST00000503805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504256 N/A 0.967±0.00 N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A 1.136±0.20 N/A N/A
ENST00000505080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505991 N/A N/A 4.606±0.00 N/A N/A 5.036±0.00 2.243±0.00 N/A N/A N/A 2.374±0.00 N/A N/A N/A
ENST00000506973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510092 1.506±0.00 1.204±0.00 1.224±0.00 1.168±0.00 2.178±0.00 1.784±0.34 1.051±0.57 2.456±1.89 2.593±0.00 3.344±0.00 1.875±0.00 2.627±0.71 3.380±0.00 1.729±0.77
ENST00000515848 N/A N/A N/A 0.821±0.00 2.112±0.00 1.320±0.00 N/A 1.445±0.00 3.368±0.00 1.158±0.68 N/A N/A N/A 2.366±0.00
ENSG00000157765 ENST00000382051 N/A N/A N/A 0.043±0.00 1.895±0.00 0.020±0.00 0.030±0.02 5.613±5.58 0.150±0.00 58.879±16.39 0.004±0.00 3.166±3.41 4.457±3.19 1.594±0.37
ENST00000503434 N/A N/A N/A N/A N/A 0.013±0.00 0.091±0.00 N/A N/A N/A N/A 0.150±0.00 N/A N/A
ENST00000504570 N/A N/A 0.633±0.00 N/A 0.639±0.00 0.012±0.00 N/A N/A 0.129±0.00 30.369±0.00 N/A N/A N/A 0.947±0.00
ENST00000507530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510033 0.047±0.00 N/A N/A N/A N/A 0.161±0.00 0.117±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000513204 N/A N/A 0.860±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228154 ENST00000506450 N/A 0.048±0.00 N/A 0.193±0.00 N/A 0.022±0.00 0.021±0.00 0.024±0.00 N/A N/A N/A N/A N/A 0.022±0.00
ENSG00000248545 ENST00000515188 N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A 0.206±0.00 N/A N/A N/A 0.266±0.13
ENSG00000248608 ENST00000504166 0.078±0.00 N/A N/A 0.081±0.00 N/A N/A N/A 0.233±0.18 N/A 0.252±0.06 N/A N/A 0.073±0.02 0.803±0.23
ENSG00000249320 ENST00000513686 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 0.022±0.00 0.018±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029176 ENSMUST00000031072 2.120±0.49 6.734±2.89 2.760±0.55 7.310±0.02 1.362±0.01 1.342±0.38 0.924±0.12 1.051±0.20 1.751±0.83 2.911±0.99 1.591±0.34 3.883±1.27 4.382±1.14 N/A
ENSMUST00000130536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138629 N/A N/A 13.760±0.00 N/A N/A N/A N/A N/A 9.630±0.00 N/A N/A 26.742±0.00 N/A 8.306±0.00
ENSMUST00000141641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142035 N/A N/A N/A 11.172±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 22.167±1.33 N/A
ENSMUST00000144574 6.225±1.74 9.209±2.93 10.362±1.14 13.354±5.10 4.450±2.74 6.169±2.54 3.752±1.12 4.074±0.42 4.755±2.88 8.149±3.35 7.391±0.85 9.358±3.92 17.921±3.93 3.636±0.47
ENSMUST00000145349 N/A N/A N/A N/A N/A 4.777±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154980 8.687±0.00 N/A N/A 16.225±4.30 11.460±3.92 7.153±0.41 5.293±1.37 6.662±1.36 4.348±0.34 12.112±1.36 N/A 18.781±2.87 21.544±2.11 6.050±2.08
ENSMUSG00000029188 ENSMUST00000094787 0.165±0.11 0.034±0.00 0.006±0.00 0.010±0.00 0.176±0.05 16.923±5.21 0.389±0.28 1.464±0.17 0.435±0.43 469.868±143.55 0.030±0.02 3.414±1.29 4.545±1.79 15.668±7.10
ENSMUST00000147243 N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168667 0.048±0.00 0.098±0.00 N/A 0.003±0.00 0.036±0.00 N/A 0.234±0.00 N/A 0.134±0.16 N/A N/A 1.282±0.75 2.867±0.88 2.786±0.00
ENSMUST00000170523 N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A 0.100±0.00 N/A N/A N/A
ENSMUSG00000090642 ENSMUST00000163795 N/A N/A N/A N/A N/A 0.184±0.11 N/A 0.160±0.08 0.030±0.02 2.256±0.17 N/A 0.216±0.03 0.187±0.12 0.062±0.02

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