C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: anaphase promoting complex subunit 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144574 Anapc4-002 ENSMUSG00000029176 10090 + 5:52834126-52866733 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000144574
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000144574 6.225±1.74 9.209±2.93 10.362±1.14 13.354±5.10 4.450±2.74 6.169±2.54 3.752±1.12 4.074±0.42 4.755±2.88 8.149±3.35 7.391±0.85 9.358±3.92 17.921±3.93 3.636±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002F9 CIL_0002F9_0002 CGP 5:52775409-52867797
CIL_0002FA CIL_0002FA_0002 CGP 5:52834015-53071664

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005680 IEA anaphase-promoting complex
GO:0030071 IEA regulation of mitotic metaphase/anaphase transition
GO:0031145 IEA anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315368 ANAPC4-001 protein_coding Homo_sapiens 0 2588
ENST00000503805 ANAPC4-010 retained_intron Homo_sapiens 0 717
ENST00000504256 ANAPC4-003 retained_intron Homo_sapiens 0 486
ENST00000505080 ANAPC4-008 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000505842 ANAPC4-011 retained_intron Homo_sapiens 0 717
ENST00000505991 ANAPC4-006 protein_coding Homo_sapiens 0 316
ENST00000507925 ANAPC4-009 retained_intron Homo_sapiens 0 283
ENST00000510092 ANAPC4-002 protein_coding Homo_sapiens 0 2573
ENST00000515848 ANAPC4-004 retained_intron Homo_sapiens 0 652

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