C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glomulin, FKBP associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029276 Glmn 10090 - 5:107548967-107597888 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078021 Glmn-001 107548967-107597639 protein_coding
  ENSMUST00000082121 Glmn-002 107549023-107597888 protein_coding
  ENSMUST00000100949 Glmn-005 107548969-107597577 protein_coding
  ENSMUST00000124140 Glmn-003 107575321-107597546 protein_coding
  ENSMUST00000124546 Glmn-006 107549024-107597544 nonsense_mediated_decay
  ENSMUST00000137939 Glmn-004 107549022-107551410 retained_intron
  ENSMUST00000143113 Glmn-007 107575287-107597639 processed_transcript
  ENSMUST00000148505 Glmn-008 107572280-107597566 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000078021ENSMUST00000082121ENSMUST00000100949
Transcript ID Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000078021 3.768±0.55 6.825±0.00 N/A N/A 3.385±1.01 1.921±0.24 4.594±0.63 5.436±1.40 N/A
ENSMUST00000082121 N/A N/A 1.695±0.00 1.056±0.13 N/A 1.561±0.00 N/A 4.274±1.38 7.676±0.00
ENSMUST00000100949 N/A N/A N/A N/A N/A N/A 3.713±0.00 4.243±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YV CIL_0008YV_0002 VISTA 5:106950899-107552442
CIL_0005ZT CIL_0005ZT_0002 CGP 5:107437997-107580596
CIL_0005ZU CIL_0005ZU_0002 CGP 5:107497378-107580596
CIL_0007CA CIL_0007CA_0003 CGP 5:107508944-107597888
CIL_0005ZN CIL_0005ZN_0002 CGP 5:107548967-107661838

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001570 ISS vasculogenesis
GO:0001843 IMP neural tube closure
GO:0005171 ISS hepatocyte growth factor receptor binding
GO:0005515 IPI protein binding
GO:0031397 IEA negative regulation of protein ubiquitination
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031462 IEA Cul2-RING ubiquitin ligase complex
GO:0031463 IEA Cul3-RING ubiquitin ligase complex
GO:0031464 IEA Cul4A-RING E3 ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0032434 IEA regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0040029 ISS regulation of gene expression, epigenetic
GO:0042130 ISS negative regulation of T cell proliferation
GO:0042327 ISS positive regulation of phosphorylation
GO:0042692 ISS muscle cell differentiation
GO:0045086 ISS positive regulation of interleukin-2 biosynthetic process
GO:0050715 ISS positive regulation of cytokine secretion
GO:0055105 IEA ubiquitin-protein transferase inhibitor activity
GO:0072359 IMP circulatory system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010958 glmnb glomulin, FKBP associated protein b protein_coding Danio_rerio
ENSDARG00000058267 glmna glomulin, FKBP associated protein a protein_coding Danio_rerio
ENSG00000174842 GLMN glomulin, FKBP associated protein protein_coding Homo_sapiens

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