C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glomulin, FKBP associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078021 Glmn-001 ENSMUSG00000029276 10090 - 5:107548967-107597639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaENSMUST00000078021
Transcript ID Bladder Brain Liver Muscle Ovary Placenta
ENSMUST00000078021 3.768±0.55 6.825±0.00 3.385±1.01 1.921±0.24 4.594±0.63 5.436±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YV CIL_0008YV_0002 VISTA 5:106950899-107552442
CIL_0005ZT CIL_0005ZT_0002 CGP 5:107437997-107580596
CIL_0005ZU CIL_0005ZU_0002 CGP 5:107497378-107580596
CIL_0007CA CIL_0007CA_0003 CGP 5:107508944-107597888
CIL_0005ZN CIL_0005ZN_0002 CGP 5:107548967-107661838

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001570 ISS vasculogenesis
GO:0001843 IMP neural tube closure
GO:0005171 ISS hepatocyte growth factor receptor binding
GO:0005515 IPI protein binding
GO:0031397 IEA negative regulation of protein ubiquitination
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031462 IEA Cul2-RING ubiquitin ligase complex
GO:0031463 IEA Cul3-RING ubiquitin ligase complex
GO:0031464 IEA Cul4A-RING E3 ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0032434 IEA regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0040029 ISS regulation of gene expression, epigenetic
GO:0042130 ISS negative regulation of T cell proliferation
GO:0042327 ISS positive regulation of phosphorylation
GO:0042692 ISS muscle cell differentiation
GO:0045086 ISS positive regulation of interleukin-2 biosynthetic process
GO:0050715 ISS positive regulation of cytokine secretion
GO:0055105 IEA ubiquitin-protein transferase inhibitor activity
GO:0072359 IMP circulatory system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370360 GLMN-001 protein_coding Homo_sapiens 0 1960
ENST00000463560 GLMN-005 protein_coding Homo_sapiens 0 595
ENST00000471465 GLMN-006 retained_intron Homo_sapiens 0 388
ENST00000495106 GLMN-002 nonsense_mediated_decay Homo_sapiens 0 1314
ENST00000495852 GLMN-004 protein_coding Homo_sapiens 0 569

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