C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: arginine/serine-rich coiled-coil 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029422 Rsrc2 10090 - 5:123728426-123749414 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050827 Rsrc2-010 123728426-123749389 protein_coding
  ENSMUST00000057795 Rsrc2-201 123728430-123749412 protein_coding
  ENSMUST00000111515 Rsrc2-202 123733369-123749412 protein_coding
  ENSMUST00000181980 Rsrc2-007 123733603-123749382 nonsense_mediated_decay
  ENSMUST00000182015 Rsrc2-009 123733603-123749381 nonsense_mediated_decay
  ENSMUST00000182093 Rsrc2-018 123739671-123749369 nonsense_mediated_decay
  ENSMUST00000182241 Rsrc2-019 123736662-123749412 nonsense_mediated_decay
  ENSMUST00000182309 Rsrc2-001 123729007-123749414 protein_coding
  ENSMUST00000182411 Rsrc2-016 123736615-123749371 nonsense_mediated_decay
  ENSMUST00000182489 Rsrc2-017 123729069-123749380 protein_coding
  ENSMUST00000182542 Rsrc2-021 123743569-123745230 retained_intron
  ENSMUST00000182556 Rsrc2-014 123729084-123742858 nonsense_mediated_decay
  ENSMUST00000182584 Rsrc2-003 123729084-123743645 nonsense_mediated_decay
  ENSMUST00000182612 Rsrc2-006 123741951-123749381 retained_intron
  ENSMUST00000182744 Rsrc2-011 123734834-123745569 retained_intron
  ENSMUST00000182809 Rsrc2-020 123740822-123749367 processed_transcript
  ENSMUST00000182861 Rsrc2-002 123729084-123743645 nonsense_mediated_decay
  ENSMUST00000182948 Rsrc2-004 123728724-123742833 processed_transcript
  ENSMUST00000182955 Rsrc2-013 123728967-123749371 protein_coding
  ENSMUST00000182968 Rsrc2-012 123734889-123741748 retained_intron
  ENSMUST00000182985 Rsrc2-015 123729247-123733694 retained_intron
  ENSMUST00000183147 Rsrc2-008 123733613-123749386 nonsense_mediated_decay
  ENSMUST00000183253 Rsrc2-005 123741949-123749381 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050827ENSMUST00000057795ENSMUST00000111515ENSMUST00000182015ENSMUST00000182309ENSMUST00000182861ENSMUST00000182948ENSMUST00000182955ENSMUST00000182968ENSMUST00000182985ENSMUST00000183253
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.249±0.00 N/A N/A
ENSMUST00000057795 N/A N/A 6.194±0.00 8.955±0.00 N/A N/A 1.344±0.00 1.783±0.00 5.839±0.84 1.954±0.44 5.314±0.66 N/A 6.663±0.46 2.048±0.30
ENSMUST00000111515 N/A 1.309±0.49 N/A 4.622±0.00 1.138±0.26 1.112±0.29 N/A N/A 2.080±1.08 1.401±0.00 N/A 1.265±0.27 N/A N/A
ENSMUST00000182015 N/A N/A N/A 43.562±0.00 N/A N/A N/A N/A N/A N/A N/A 77.108±0.00 N/A 91.799±0.00
ENSMUST00000182309 N/A N/A 11.907±0.72 33.368±23.88 N/A 1.856±0.06 N/A 1.565±0.00 8.866±1.96 2.129±0.00 6.954±0.63 29.719±40.65 27.420±24.63 24.137±42.76
ENSMUST00000182861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.737±11.88 N/A
ENSMUST00000182948 2.410±0.78 N/A 13.700±1.12 20.062±2.78 3.252±1.85 1.570±0.36 3.751±0.59 3.942±1.51 7.725±6.92 4.988±1.62 4.929±0.82 15.739±12.83 17.977±4.25 5.665±0.80
ENSMUST00000182955 1.592±0.10 1.651±0.07 N/A 9.671±0.00 N/A N/A 1.506±0.00 N/A N/A N/A N/A 1.306±0.00 N/A 2.604±0.00
ENSMUST00000182968 N/A 1.155±0.19 N/A 5.028±0.00 1.261±0.35 1.127±0.09 N/A N/A 0.794±0.00 N/A N/A 1.744±0.93 N/A N/A
ENSMUST00000182985 5.588±0.00 7.252±1.39 N/A N/A 5.923±1.40 9.441±1.95 N/A N/A 3.474±0.77 5.168±0.00 N/A 12.030±5.94 N/A N/A
ENSMUST00000183253 N/A N/A N/A N/A N/A 1.567±0.00 N/A N/A 1.131±0.34 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PD CIL_0002PD_0002 CGP 5:123698302-123749414
CIL_0002PE CIL_0002PE_0002 CGP 5:123728426-123821593

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042534 rsrc2 arginine/serine-rich coiled-coil 2 protein_coding Danio_rerio
ENSG00000111011 RSRC2 arginine/serine-rich coiled-coil 2 protein_coding Homo_sapiens

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