C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginine/serine-rich coiled-coil 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182309 Rsrc2-001 ENSMUSG00000029422 10090 - 5:123729007-123749414 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182309
Transcript ID Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182309 11.907±0.72 33.368±23.88 1.856±0.06 1.565±0.00 8.866±1.96 2.129±0.00 6.954±0.63 29.719±40.65 27.420±24.63 24.137±42.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PD CIL_0002PD_0002 CGP 5:123698302-123749414
CIL_0002PE CIL_0002PE_0002 CGP 5:123728426-123821593

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331738 RSRC2-001 protein_coding Homo_sapiens 0 1965
ENST00000344591 RSRC2-013 protein_coding Homo_sapiens 0 846
ENST00000392442 RSRC2-020 processed_transcript Homo_sapiens 0 963
ENST00000433877 RSRC2-019 nonsense_mediated_decay Homo_sapiens 0 1605
ENST00000524399 RSRC2-018 retained_intron Homo_sapiens 0 342
ENST00000525332 RSRC2-014 processed_transcript Homo_sapiens 0 392
ENST00000525335 RSRC2-010 retained_intron Homo_sapiens 0 1173
ENST00000525570 RSRC2-007 retained_intron Homo_sapiens 0.00000006 62
ENST00000526560 RSRC2-011 protein_coding Homo_sapiens 0 534
ENST00000527173 RSRC2-003 retained_intron Homo_sapiens 0 1624
ENST00000527399 RSRC2-004 nonsense_mediated_decay Homo_sapiens 0 732
ENST00000527796 RSRC2-005 retained_intron Homo_sapiens 0 573
ENST00000528263 RSRC2-012 nonsense_mediated_decay Homo_sapiens 0 641
ENST00000531389 RSRC2-015 retained_intron Homo_sapiens 2e-26 124
ENST00000532695 RSRC2-002 nonsense_mediated_decay Homo_sapiens 0 1624

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