C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002PD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000033030-ENSG00000111011 CGP 9606 12:122472870-122527000
GeneTranscriptPositionBiotype
ENSG00000033030 (ZCCHC8)
zinc finger, CCHC domain containing 8 		ENST00000536306 (ZCCHC8-003) 122472870-122499325 protein_coding
ENST00000536663 (ZCCHC8-006) 122477917-122500248 protein_coding
ENST00000538116 (ZCCHC8-005) 122472893-122478533 protein_coding
ENST00000538493 (ZCCHC8-009) 122482002-122483690 retained_intron
ENST00000540586 (ZCCHC8-004) 122481991-122500520 protein_coding
ENST00000542892 (ZCCHC8-008) 122473940-122481422 protein_coding
ENST00000543897 (ZCCHC8-002) 122472870-122500595 protein_coding
ENST00000544054 (ZCCHC8-007) 122477838-122484162 protein_coding
ENST00000546149 (ZCCHC8-010) 122481522-122482458 retained_intron
ENSG00000111011 (RSRC2)
arginine/serine-rich coiled-coil 2 		ENST00000331738 (RSRC2-001) 122503458-122526999 protein_coding
ENST00000344591 (RSRC2-013) 122508367-122526960 protein_coding
ENST00000392442 (RSRC2-020) 122505330-122513917 processed_transcript
ENST00000433877 (RSRC2-019) 122505059-122526936 nonsense_mediated_decay
ENST00000524399 (RSRC2-018) 122514773-122517396 retained_intron
ENST00000525332 (RSRC2-014) 122505380-122508406 processed_transcript
ENST00000525335 (RSRC2-010) 122508250-122526949 retained_intron
ENST00000525387 (RSRC2-009) 122519910-122526954 retained_intron
ENST00000525570 (RSRC2-007) 122520978-122526949 retained_intron
ENST00000526560 (RSRC2-011) 122517236-122526962 protein_coding
ENST00000527173 (RSRC2-003) 122505306-122523756 retained_intron
ENST00000527399 (RSRC2-004) 122511111-122526995 nonsense_mediated_decay
ENST00000527461 (RSRC2-008) 122518840-122526959 processed_transcript
ENST00000527796 (RSRC2-005) 122515163-122526987 retained_intron
ENST00000528263 (RSRC2-012) 122508378-122519028 nonsense_mediated_decay
ENST00000528279 (RSRC2-006) 122520546-122526940 protein_coding
ENST00000531389 (RSRC2-015) 122506372-122508366 retained_intron
ENST00000531639 (RSRC2-017) 122518930-122522442 retained_intron
ENST00000532186 (RSRC2-016) 122519443-122522291 processed_transcript
ENST00000532695 (RSRC2-002) 122505059-122527000 nonsense_mediated_decay
ENSG00000252192 (SNORA9)
Small nucleolar RNA SNORA9 		ENST00000516383 (SNORA9.1-204) 122492113-122492241 snoRNA
ENSG00000275265 (RP11-15J22.8)
 ENST00000619123 (RP11-15J22.8-001) 122501187-122501641 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0002PD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029427-ENSMUSG00000029422 CGP 10090 5:123698302-123749414
GeneTranscriptPositionBiotype
ENSMUSG00000029422 (Rsrc2)
arginine/serine-rich coiled-coil 2 		ENSMUST00000050827 (Rsrc2-010) 123728426-123749389 protein_coding
ENSMUST00000057795 (Rsrc2-201) 123728430-123749412 protein_coding
ENSMUST00000111515 (Rsrc2-202) 123733369-123749412 protein_coding
ENSMUST00000181980 (Rsrc2-007) 123733603-123749382 nonsense_mediated_decay
ENSMUST00000182015 (Rsrc2-009) 123733603-123749381 nonsense_mediated_decay
ENSMUST00000182093 (Rsrc2-018) 123739671-123749369 nonsense_mediated_decay
ENSMUST00000182241 (Rsrc2-019) 123736662-123749412 nonsense_mediated_decay
ENSMUST00000182309 (Rsrc2-001) 123729007-123749414 protein_coding
ENSMUST00000182411 (Rsrc2-016) 123736615-123749371 nonsense_mediated_decay
ENSMUST00000182489 (Rsrc2-017) 123729069-123749380 protein_coding
ENSMUST00000182542 (Rsrc2-021) 123743569-123745230 retained_intron
ENSMUST00000182556 (Rsrc2-014) 123729084-123742858 nonsense_mediated_decay
ENSMUST00000182584 (Rsrc2-003) 123729084-123743645 nonsense_mediated_decay
ENSMUST00000182612 (Rsrc2-006) 123741951-123749381 retained_intron
ENSMUST00000182744 (Rsrc2-011) 123734834-123745569 retained_intron
ENSMUST00000182809 (Rsrc2-020) 123740822-123749367 processed_transcript
ENSMUST00000182861 (Rsrc2-002) 123729084-123743645 nonsense_mediated_decay
ENSMUST00000182948 (Rsrc2-004) 123728724-123742833 processed_transcript
ENSMUST00000182955 (Rsrc2-013) 123728967-123749371 protein_coding
ENSMUST00000182968 (Rsrc2-012) 123734889-123741748 retained_intron
ENSMUST00000182985 (Rsrc2-015) 123729247-123733694 retained_intron
ENSMUST00000183147 (Rsrc2-008) 123733613-123749386 nonsense_mediated_decay
ENSMUST00000183253 (Rsrc2-005) 123741949-123749381 retained_intron
ENSMUSG00000029427 (Zcchc8)
zinc finger, CCHC domain containing 8 		ENSMUST00000031376 (Zcchc8-201) 123698302-123721044 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PD_0001ENSG00000033030ENST00000536306ENST00000536663ENST00000538116ENST00000542892ENST00000543897ENST00000544054ENSG00000111011ENST00000331738ENST00000392442ENST00000433877ENST00000525335ENST00000526560ENST00000527173ENST00000527796ENST00000528263ENST00000531389ENST00000532695ENSG00000252192ENST00000516383ENSG00000275265ENST00000619123CIL_0002PD_0002ENSMUSG00000029422ENSMUST00000050827ENSMUST00000057795ENSMUST00000111515ENSMUST00000182015ENSMUST00000182309ENSMUST00000182861ENSMUST00000182948ENSMUST00000182955ENSMUST00000182968ENSMUST00000182985ENSMUST00000183253ENSMUSG00000029427ENSMUST00000031376
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000033030 ENST00000536306 0.974±0.00 N/A N/A 0.562±0.00 N/A 0.803±0.00 0.564±0.31 1.276±0.43 1.106±0.12 N/A 1.421±0.00 2.966±0.00 0.895±0.13 1.792±0.00
ENST00000536663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.566±0.00
ENST00000538116 N/A 3.631±0.00 N/A 1.166±0.00 N/A 1.747±0.00 0.977±0.00 2.961±0.00 1.977±0.00 3.006±0.00 1.866±1.12 5.217±1.97 3.136±1.55 4.108±2.04
ENST00000538493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542892 N/A N/A N/A N/A N/A N/A N/A N/A 1.152±0.00 N/A N/A N/A N/A N/A
ENST00000543897 N/A 0.914±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544054 N/A N/A N/A N/A N/A N/A 0.519±0.00 0.715±0.00 N/A N/A 1.587±0.00 N/A N/A N/A
ENST00000546149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000111011 ENST00000331738 2.374±0.00 N/A 1.178±0.00 3.053±0.00 3.132±1.06 1.977±0.00 1.497±0.64 4.728±0.00 1.190±0.00 N/A N/A 2.599±0.58 2.392±0.00 4.519±0.00
ENST00000344591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392442 N/A 15.981±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00 15.618±0.00 8.009±7.40 23.792±18.26
ENST00000524399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525335 N/A N/A 1.554±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.321±0.00
ENST00000525387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526560 26.439±0.00 N/A N/A 32.687±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.366±0.00
ENST00000527173 N/A N/A 0.986±0.00 N/A N/A N/A N/A N/A N/A N/A 0.260±0.00 N/A N/A N/A
ENST00000527399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527796 N/A 3.746±0.00 1.430±0.00 2.179±0.00 4.676±0.00 3.246±0.00 0.923±0.00 0.911±0.00 N/A 7.623±0.00 N/A 3.409±0.00 N/A N/A
ENST00000528263 N/A N/A N/A N/A N/A N/A N/A N/A 6.071±0.00 N/A N/A N/A N/A N/A
ENST00000528279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.011±0.00 N/A N/A N/A
ENST00000531639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532695 9.830±0.00 14.124±0.00 1.734±0.00 14.834±0.00 8.160±3.96 7.291±4.35 10.243±0.00 2.886±0.00 3.323±0.36 N/A 0.169±0.00 6.508±2.63 5.616±0.79 16.063±1.35
ENSG00000252192 ENST00000516383 N/A 0.912±0.00 N/A 0.330±0.00 N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A 0.713±0.00
ENSG00000275265 ENST00000619123 N/A 0.083±0.00 N/A 0.128±0.01 0.128±0.00 N/A 0.040±0.00 N/A 0.076±0.00 N/A N/A 0.144±0.00 N/A 0.448±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029422 ENSMUST00000050827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.249±0.00 N/A N/A
ENSMUST00000057795 N/A N/A 6.194±0.00 8.955±0.00 N/A N/A 1.344±0.00 1.783±0.00 5.839±0.84 1.954±0.44 5.314±0.66 N/A 6.663±0.46 2.048±0.30
ENSMUST00000111515 N/A 1.309±0.49 N/A 4.622±0.00 1.138±0.26 1.112±0.29 N/A N/A 2.080±1.08 1.401±0.00 N/A 1.265±0.27 N/A N/A
ENSMUST00000181980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182015 N/A N/A N/A 43.562±0.00 N/A N/A N/A N/A N/A N/A N/A 77.108±0.00 N/A 91.799±0.00
ENSMUST00000182093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182309 N/A N/A 11.907±0.72 33.368±23.88 N/A 1.856±0.06 N/A 1.565±0.00 8.866±1.96 2.129±0.00 6.954±0.63 29.719±40.65 27.420±24.63 24.137±42.76
ENSMUST00000182411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.737±11.88 N/A
ENSMUST00000182948 2.410±0.78 N/A 13.700±1.12 20.062±2.78 3.252±1.85 1.570±0.36 3.751±0.59 3.942±1.51 7.725±6.92 4.988±1.62 4.929±0.82 15.739±12.83 17.977±4.25 5.665±0.80
ENSMUST00000182955 1.592±0.10 1.651±0.07 N/A 9.671±0.00 N/A N/A 1.506±0.00 N/A N/A N/A N/A 1.306±0.00 N/A 2.604±0.00
ENSMUST00000182968 N/A 1.155±0.19 N/A 5.028±0.00 1.261±0.35 1.127±0.09 N/A N/A 0.794±0.00 N/A N/A 1.744±0.93 N/A N/A
ENSMUST00000182985 5.588±0.00 7.252±1.39 N/A N/A 5.923±1.40 9.441±1.95 N/A N/A 3.474±0.77 5.168±0.00 N/A 12.030±5.94 N/A N/A
ENSMUST00000183147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183253 N/A N/A N/A N/A N/A 1.567±0.00 N/A N/A 1.131±0.34 N/A N/A N/A N/A N/A
ENSMUSG00000029427 ENSMUST00000031376 3.560±1.31 9.627±1.32 3.226±0.24 5.246±1.50 5.243±2.29 7.128±2.90 1.839±0.57 3.711±0.96 4.092±2.71 6.178±1.16 1.785±0.44 7.409±2.38 5.135±2.14 9.555±1.27

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