C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: matrix metallopeptidase 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029436 Mmp17 10090 + 5:129584169-129608875 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031390 Mmp17-001 129584169-129608875 protein_coding
  ENSMUST00000177802 Mmp17-002 129596626-129602451 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031390
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031390 6.089±4.55 1.107±0.12 2.363±0.11 13.182±7.02 0.951±0.25 6.881±1.62 0.749±0.23 1.066±0.20 0.241±0.07 1.366±0.18 0.147±0.06 6.158±2.84 1.172±1.25 0.460±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042X CIL_00042X_0002 CGP 5:129501231-129608875

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005886 IEA plasma membrane
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078915 mmp17a matrix metallopeptidase 17a protein_coding Danio_rerio
ENSG00000198598 MMP17 matrix metallopeptidase 17 (membrane-inserted) protein_coding Homo_sapiens

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