C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00042X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000061936-ENSG00000198598 CGP 9606 12:131711081-131851783
GeneTranscriptPositionBiotype
ENSG00000061936 (SFSWAP)
splicing factor, suppressor of white-apricot family
ENST00000261674 (SFSWAP-001) 131711089-131799737 protein_coding
ENST00000535202 (SFSWAP-011) 131726989-131753489 retained_intron
ENST00000535236 (SFSWAP-004) 131711100-131778181 retained_intron
ENST00000535399 (SFSWAP-006) 131711095-131714495 retained_intron
ENST00000537164 (SFSWAP-008) 131753123-131778195 protein_coding
ENST00000537582 (SFSWAP-010) 131796118-131799682 retained_intron
ENST00000538548 (SFSWAP-005) 131711090-131786597 nonsense_mediated_decay
ENST00000539506 (SFSWAP-009) 131783468-131799737 processed_transcript
ENST00000540469 (SFSWAP-007) 131711081-131725609 retained_intron
ENST00000541286 (SFSWAP-003) 131711137-131799602 protein_coding
ENST00000542813 (SFSWAP-002) 131723258-131727034 processed_transcript
ENSG00000198598 (MMP17)
matrix metallopeptidase 17 (membrane-inserted)
ENST00000360564 (MMP17-001) 131828393-131851771 protein_coding
ENST00000534865 (MMP17-005) 131840025-131849981 protein_coding
ENST00000535004 (MMP17-010) 131845295-131851367 protein_coding
ENST00000535182 (MMP17-012) 131840736-131845391 processed_transcript
ENST00000535271 (MMP17-011) 131849835-131851332 retained_intron
ENST00000535291 (MMP17-002) 131838056-131851783 protein_coding
ENST00000537848 (MMP17-007) 131844870-131851030 nonsense_mediated_decay
ENST00000542142 (MMP17-006) 131841768-131844721 retained_intron
ENST00000542648 (MMP17-008) 131844961-131850062 protein_coding
ENST00000545671 (MMP17-003) 131828406-131841736 protein_coding
ENST00000545790 (MMP17-004) 131828540-131840747 protein_coding
ENSG00000255933 (RP11-495K9.5)
ENST00000537032 (RP11-495K9.5-001) 131756966-131758047 lincRNA
CIL_00042X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029439-ENSMUSG00000029436 CGP 10090 5:129501231-129608875
GeneTranscriptPositionBiotype
ENSMUSG00000029436 (Mmp17)
matrix metallopeptidase 17
ENSMUST00000031390 (Mmp17-001) 129584169-129608875 protein_coding
ENSMUST00000177802 (Mmp17-002) 129596626-129602451 retained_intron
ENSMUSG00000029439 (Sfswap)
splicing factor, suppressor of white-apricot homolog (Drosophila)
ENSMUST00000053737 (Sfswap-201) 129501231-129571383 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042X_0001ENSG00000061936ENST00000261674ENST00000535202ENST00000535236ENST00000535399ENST00000537164ENST00000537582ENST00000538548ENST00000539506ENST00000540469ENST00000541286ENST00000542813ENSG00000198598ENST00000360564ENST00000534865ENST00000535004ENST00000535182ENST00000535271ENST00000535291ENST00000537848ENST00000542142ENST00000542648ENST00000545671ENST00000545790ENSG00000255933ENST00000537032CIL_00042X_0002ENSMUSG00000029436ENSMUST00000031390ENSMUST00000177802ENSMUSG00000029439ENSMUST00000053737
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042X_0001ENSG00000061936ENST00000261674ENST00000535236ENST00000537164ENST00000538548ENST00000540469ENST00000541286ENSG00000198598ENST00000360564ENST00000534865ENST00000535004ENST00000535182ENST00000535271ENST00000535291ENST00000537848ENST00000542142ENST00000542648ENST00000545671ENST00000545790ENSG00000255933ENST00000537032CIL_00042X_0002ENSMUSG00000029436ENSMUST00000031390ENSMUSG00000029439ENSMUST00000053737
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000061936 ENST00000261674 7.736±0.00 13.257±0.00 N/A 4.936±1.99 1.174±0.00 3.060±0.00 2.186±0.00 1.687±1.36 1.825±0.00 2.870±1.40 2.133±1.82 10.291±4.67 7.610±0.99 8.303±1.62
ENST00000535202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.239±0.00 N/A N/A
ENST00000535399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537164 N/A N/A N/A N/A N/A 7.469±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538548 N/A N/A N/A N/A N/A N/A 1.166±0.00 2.204±0.00 N/A 1.934±0.00 2.498±1.96 5.486±0.12 2.819±0.00 6.289±0.00
ENST00000539506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540469 N/A N/A 2.193±0.00 2.122±0.00 1.913±0.00 N/A 0.604±0.00 0.646±0.06 1.118±0.00 2.299±0.00 N/A 4.160±0.00 N/A N/A
ENST00000541286 3.957±0.00 4.107±0.00 N/A 7.794±0.00 3.668±0.00 5.191±0.00 1.207±0.00 2.803±0.00 1.091±0.00 6.491±0.00 4.163±0.00 N/A N/A 5.457±0.00
ENST00000542813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198598 ENST00000360564 0.693±0.00 0.433±0.00 N/A 6.434±0.00 1.597±1.44 0.688±0.00 0.123±0.00 0.161±0.00 0.054±0.00 1.039±0.00 0.072±0.00 4.006±3.89 0.390±0.00 1.154±0.92
ENST00000534865 N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.08 N/A 0.070±0.00 N/A N/A 0.228±0.00
ENST00000535004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.444±0.00 1.046±0.00 1.231±0.00
ENST00000535182 N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A 0.778±0.00 N/A N/A 0.743±0.03 N/A
ENST00000535271 N/A 0.859±0.00 N/A N/A N/A N/A N/A 0.274±0.00 0.873±0.00 N/A N/A N/A N/A N/A
ENST00000535291 N/A N/A N/A 2.477±0.00 0.736±0.00 N/A N/A N/A N/A N/A N/A 0.214±0.00 N/A 0.378±0.00
ENST00000537848 N/A N/A N/A 2.476±0.00 N/A N/A N/A N/A 0.754±0.00 N/A N/A 0.848±0.00 0.416±0.00 N/A
ENST00000542142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A
ENST00000542648 0.579±0.00 N/A N/A N/A N/A 0.564±0.46 N/A N/A N/A N/A 0.248±0.00 0.593±0.00 0.551±0.00 0.654±0.00
ENST00000545671 N/A N/A N/A N/A N/A N/A 0.286±0.15 1.021±0.00 N/A 0.251±0.00 N/A N/A N/A N/A
ENST00000545790 N/A N/A N/A N/A 0.756±0.00 0.232±0.00 N/A 0.270±0.00 0.099±0.00 N/A N/A N/A 0.281±0.00 N/A
ENSG00000255933 ENST00000537032 0.301±0.00 0.400±0.00 N/A 0.137±0.00 0.320±0.26 0.804±0.00 0.166±0.00 0.031±0.00 1.553±0.00 2.239±0.00 N/A 0.422±0.26 0.220±0.00 0.201±0.14
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029436 ENSMUST00000031390 6.089±4.55 1.107±0.12 2.363±0.11 13.182±7.02 0.951±0.25 6.881±1.62 0.749±0.23 1.066±0.20 0.241±0.07 1.366±0.18 0.147±0.06 6.158±2.84 1.172±1.25 0.460±0.32
ENSMUST00000177802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029439 ENSMUST00000053737 12.459±4.01 18.826±5.20 12.010±2.27 24.881±5.45 13.103±6.15 14.932±5.04 4.606±1.12 6.557±2.36 8.891±4.85 19.220±4.03 3.996±1.09 20.931±9.05 10.968±4.88 7.247±1.50

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