C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: splicing factor, suppressor of white-apricot homolog (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029439 Sfswap 10090 + 5:129501231-129571383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053737 Sfswap-201 129501231-129571383 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053737 12.459±4.01 18.826±5.20 12.010±2.27 24.881±5.45 13.103±6.15 14.932±5.04 4.606±1.12 6.557±2.36 8.891±4.85 19.220±4.03 3.996±1.09 20.931±9.05 10.968±4.88 7.247±1.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042Y CIL_00042Y_0002 CGP 5:129096750-129571383
CIL_00042X CIL_00042X_0002 CGP 5:129501231-129608875

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0048025 ISS negative regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005980 sfswap splicing factor, suppressor of white-apricot homolog (Drosophila) protein_coding Danio_rerio
ENSG00000061936 SFSWAP splicing factor, suppressor of white-apricot family protein_coding Homo_sapiens

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