C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029467 Atp2a2 10090 - 5:122442702-122502225 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031423 Atp2a2-201 122456335-122502225 protein_coding
  ENSMUST00000177974 Atp2a2-202 122453514-122502225 protein_coding
  ENSMUST00000179939 Atp2a2-203 122442702-122502225 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031423ENSMUST00000177974ENSMUST00000179939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031423 40.606±11.73 35.536±4.59 101.522±8.08 21.382±6.94 26.834±3.02 55.237±11.11 N/A 54.411±7.68 26.798±4.86 45.549±1.83 11.777±5.34 62.016±12.35 26.405±9.70 33.092±11.45
ENSMUST00000177974 8.422±2.61 N/A 101.414±13.90 10.314±0.00 9.358±3.82 9.273±1.69 1988.835±98.15 8.469±0.02 4.902±0.00 36.347±7.76 116.016±70.95 N/A N/A N/A
ENSMUST00000179939 N/A 27.336±0.00 N/A 166.861±0.00 N/A 20.237±9.59 N/A N/A N/A N/A N/A 47.951±27.73 22.227±11.18 35.771±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002026 IGI regulation of the force of heart contraction
GO:0005388 IDA calcium-transporting ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006874 IGI cellular calcium ion homeostasis
GO:0006937 TAS regulation of muscle contraction
GO:0006984 IMP ER-nucleus signaling pathway
GO:0008022 IPI protein C-terminus binding
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016529 TAS sarcoplasmic reticulum
GO:0019899 IPI enzyme binding
GO:0044548 IEA S100 protein binding
GO:0045822 IGI negative regulation of heart contraction
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005122 atp2a2b ATPase, Ca++ transporting, cardiac muscle, slow twitch 2b protein_coding Danio_rerio
ENSDARG00000029439 atp2a2a ATPase, Ca++ transporting, cardiac muscle, slow twitch 2a protein_coding Danio_rerio
ENSG00000174437 ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 protein_coding Homo_sapiens

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