C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 106B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029571 Tmem106b 10090 + 6:13069759-13089269 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031556 Tmem106b-001 13069839-13089269 protein_coding
  ENSMUST00000122916 Tmem106b-005 13070251-13081652 protein_coding
  ENSMUST00000124234 Tmem106b-003 13069759-13075094 protein_coding
  ENSMUST00000136742 Tmem106b-006 13069851-13075385 retained_intron
  ENSMUST00000142211 Tmem106b-004 13069816-13071953 protein_coding
  ENSMUST00000142798 Tmem106b-002 13069854-13076370 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031556ENSMUST00000124234ENSMUST00000136742
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031556 14.019±3.00 32.492±5.42 16.944±2.04 7.215±0.42 10.108±3.69 12.479±1.48 10.159±2.99 38.954±6.07 19.561±16.07 18.079±1.71 5.848±1.18 17.382±8.61 7.474±3.77 2.885±1.24
ENSMUST00000124234 N/A N/A N/A 77.782±0.00 N/A N/A N/A N/A N/A N/A N/A 89.305±0.00 43.918±4.12 16.538±0.00
ENSMUST00000136742 N/A 52.853±21.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022R CIL_00022R_0002 CGP 6:12311610-13089269
CIL_00022S CIL_00022S_0002 CGP 6:13069759-13224965

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005765 ISS lysosomal membrane
GO:0005768 IEA endosome
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0032418 ISS lysosome localization
GO:0048813 ISS dendrite morphogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035949 tmem106bb transmembrane protein 106Bb protein_coding Danio_rerio
ENSG00000106460 TMEM106B transmembrane protein 106B protein_coding Homo_sapiens

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