C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 106B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031556 Tmem106b-001 ENSMUSG00000029571 10090 + 6:13069839-13089269 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031556
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031556 14.019±3.00 32.492±5.42 16.944±2.04 7.215±0.42 10.108±3.69 12.479±1.48 10.159±2.99 38.954±6.07 19.561±16.07 18.079±1.71 5.848±1.18 17.382±8.61 7.474±3.77 2.885±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022R CIL_00022R_0002 CGP 6:12311610-13089269
CIL_00022S CIL_00022S_0002 CGP 6:13069759-13224965

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005765 ISS lysosomal membrane
GO:0005768 IEA endosome
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0032418 ISS lysosome localization
GO:0048813 ISS dendrite morphogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000396667 TMEM106B-001 protein_coding Homo_sapiens 0 1173
ENST00000396668 TMEM106B-002 protein_coding Homo_sapiens 0 1168
ENST00000420833 TMEM106B-003 nonsense_mediated_decay Homo_sapiens 0 516
ENST00000444443 TMEM106B-004 protein_coding Homo_sapiens 0 411
ENST00000462754 TMEM106B-008 retained_intron Homo_sapiens 0 335

Loading