C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029587 Zfp12 10090 + 5:143235163-143248834 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032591 Zfp12-001 143235174-143248834 protein_coding
  ENSMUST00000075916 Zfp12-003 143235247-143247956 nonsense_mediated_decay
  ENSMUST00000077485 Zfp12-002 143235163-143247948 protein_coding
  ENSMUST00000160195 Zfp12-004 143240039-143244630 processed_transcript
  ENSMUST00000162861 Zfp12-005 143235779-143240080 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032591ENSMUST00000075916ENSMUST00000077485
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032591 1.377±0.34 1.517±0.27 0.852±0.04 1.812±0.88 1.198±0.37 1.270±0.71 0.510±0.08 1.212±0.23 0.490±0.17 1.591±0.31 0.287±0.05 2.509±1.23 0.631±0.16 0.591±0.24
ENSMUST00000075916 1.096±0.26 N/A 1.677±0.02 3.194±0.38 1.643±0.01 N/A 0.594±0.11 0.868±0.18 0.586±0.23 0.924±0.00 1.109±0.42 4.556±0.57 1.678±0.88 1.752±0.66
ENSMUST00000077485 4.105±1.67 4.565±0.89 1.790±0.18 3.239±1.98 3.741±1.20 3.021±0.52 1.216±0.10 2.638±0.70 1.095±0.40 4.212±1.02 1.038±0.60 6.448±2.78 1.553±0.56 1.569±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0002 VISTA 5:142700569-143309825

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000164631 ZNF12 zinc finger protein 12 protein_coding Homo_sapiens

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