C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032591 Zfp12-001 ENSMUSG00000029587 10090 + 5:143235174-143248834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032591
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032591 1.377±0.34 1.517±0.27 0.852±0.04 1.812±0.88 1.198±0.37 1.270±0.71 0.510±0.08 1.212±0.23 0.490±0.17 1.591±0.31 0.287±0.05 2.509±1.23 0.631±0.16 0.591±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0002 VISTA 5:142700569-143309825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079139 ctcf-001 protein_coding Danio_rerio 0.0001 55
ENST00000262941 ZSCAN25-201 protein_coding Homo_sapiens 0.00000000008 73
ENST00000274599 ZNF300-201 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000334715 ZSCAN25-202 protein_coding Homo_sapiens 0.0000000002 73
ENST00000342651 ZNF12-003 protein_coding Homo_sapiens 0 294
ENST00000353796 RBAK-001 protein_coding Homo_sapiens 6e-36 158
ENST00000356555 ZNF300P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 7e-37 159
ENST00000377073 ZNF157-001 protein_coding Homo_sapiens 9e-27 126
ENST00000394150 ZSCAN25-002 nonsense_mediated_decay Homo_sapiens 0.0000000001 73
ENST00000394152 ZSCAN25-001 protein_coding Homo_sapiens 0.0000000002 73
ENST00000394226 ZNF300-001 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000396904 RBAK-RBAKDN-002 protein_coding Homo_sapiens 1e-36 158
ENST00000396912 RBAK-201 protein_coding Homo_sapiens 9e-36 158
ENST00000404360 ZNF12-002 protein_coding Homo_sapiens 0 274
ENST00000405858 ZNF12-001 protein_coding Homo_sapiens 0 294
ENST00000407184 RBAK-RBAKDN-001 protein_coding Homo_sapiens 1e-36 158
ENST00000418587 ZNF300-202 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000427179 ZNF300-002 protein_coding Homo_sapiens 1.99993e-41 176
ENST00000446148 ZNF300-203 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000476992 RBAK-002 retained_intron Homo_sapiens 3e-36 156
ENST00000481424 ZSCAN25-003 retained_intron Homo_sapiens 0.0000000003 73
ENST00000485586 ZSCAN25-004 retained_intron Homo_sapiens 0.0000000002 73
ENST00000520773 ZNF300P1-002 processed_transcript Homo_sapiens 1e-36 159

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