C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075916 Zfp12-003 ENSMUSG00000029587 10090 + 5:143235247-143247956 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075916
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075916 1.096±0.26 1.677±0.02 3.194±0.38 1.643±0.01 0.594±0.11 0.868±0.18 0.586±0.23 0.924±0.00 1.109±0.42 4.556±0.57 1.678±0.88 1.752±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0002 VISTA 5:142700569-143309825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079139 ctcf-001 protein_coding Danio_rerio 0.00008 55
ENST00000262941 ZSCAN25-201 protein_coding Homo_sapiens 0.00000000008 73
ENST00000274599 ZNF300-201 protein_coding Homo_sapiens 0.000000008 68
ENST00000334715 ZSCAN25-202 protein_coding Homo_sapiens 0.0000000002 73
ENST00000342651 ZNF12-003 protein_coding Homo_sapiens 5e-30 137
ENST00000353796 RBAK-001 protein_coding Homo_sapiens 4e-27 128
ENST00000356555 ZNF300P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.000000004 68
ENST00000377073 ZNF157-001 protein_coding Homo_sapiens 1e-19 102
ENST00000394150 ZSCAN25-002 nonsense_mediated_decay Homo_sapiens 0.0000000001 73
ENST00000394152 ZSCAN25-001 protein_coding Homo_sapiens 0.0000000002 73
ENST00000394226 ZNF300-001 protein_coding Homo_sapiens 0.000000008 68
ENST00000396904 RBAK-RBAKDN-002 protein_coding Homo_sapiens 8e-28 128
ENST00000396912 RBAK-201 protein_coding Homo_sapiens 7e-27 128
ENST00000404360 ZNF12-002 protein_coding Homo_sapiens 8e-30 137
ENST00000405858 ZNF12-001 protein_coding Homo_sapiens 9e-30 137
ENST00000407184 RBAK-RBAKDN-001 protein_coding Homo_sapiens 1e-27 128
ENST00000418587 ZNF300-202 protein_coding Homo_sapiens 0.000000008 68
ENST00000427179 ZNF300-002 protein_coding Homo_sapiens 0.00000001 68
ENST00000446148 ZNF300-203 protein_coding Homo_sapiens 0.000000008 68
ENST00000476992 RBAK-002 retained_intron Homo_sapiens 3e-27 126
ENST00000481424 ZSCAN25-003 retained_intron Homo_sapiens 0.0000000003 73
ENST00000485586 ZSCAN25-004 retained_intron Homo_sapiens 0.0000000002 73
ENST00000520773 ZNF300P1-002 processed_transcript Homo_sapiens 0.000000007 68

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