C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077485 Zfp12-002 ENSMUSG00000029587 10090 + 5:143235163-143247948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077485
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077485 4.105±1.67 4.565±0.89 1.790±0.18 3.239±1.98 3.741±1.20 3.021±0.52 1.216±0.10 2.638±0.70 1.095±0.40 4.212±1.02 1.038±0.60 6.448±2.78 1.553±0.56 1.569±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0002 VISTA 5:142700569-143309825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079139 ctcf-001 protein_coding Danio_rerio 0.00008 55
ENST00000262941 ZSCAN25-201 protein_coding Homo_sapiens 0.00000000008 73
ENST00000334715 ZSCAN25-202 protein_coding Homo_sapiens 0.0000000002 73
ENST00000342651 ZNF12-003 protein_coding Homo_sapiens 1e-20 106
ENST00000353796 RBAK-001 protein_coding Homo_sapiens 2e-26 126
ENST00000377073 ZNF157-001 protein_coding Homo_sapiens 1e-19 102
ENST00000394150 ZSCAN25-002 nonsense_mediated_decay Homo_sapiens 0.0000000001 73
ENST00000394152 ZSCAN25-001 protein_coding Homo_sapiens 0.0000000002 73
ENST00000396904 RBAK-RBAKDN-002 protein_coding Homo_sapiens 3e-27 126
ENST00000396912 RBAK-201 protein_coding Homo_sapiens 2e-26 126
ENST00000404360 ZNF12-002 protein_coding Homo_sapiens 2e-20 106
ENST00000405858 ZNF12-001 protein_coding Homo_sapiens 3e-20 106
ENST00000407184 RBAK-RBAKDN-001 protein_coding Homo_sapiens 4e-27 126
ENST00000476992 RBAK-002 retained_intron Homo_sapiens 9e-27 124
ENST00000481424 ZSCAN25-003 retained_intron Homo_sapiens 0.0000000003 73
ENST00000485586 ZSCAN25-004 retained_intron Homo_sapiens 0.0000000002 73

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