C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: procollagen C-endopeptidase enhancer protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054564 Pcolce-002 ENSMUSG00000029718 10090 - 5:137605108-137611376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleOvaryENSMUST00000054564
Transcript ID Breast Muscle Ovary
ENSMUST00000054564 23.421±0.00 3.206±0.68 26.665±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005518 ISO collagen binding
GO:0005615 IEA extracellular space
GO:0006508 IDA proteolysis
GO:0008201 ISO heparin binding
GO:0010952 IEA positive regulation of peptidase activity
GO:0016504 ISO peptidase activator activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223061 PCOLCE-001 protein_coding Homo_sapiens 0 486
ENST00000462260 PCOLCE-004 retained_intron Homo_sapiens 0 335
ENST00000468214 PCOLCE-007 retained_intron Homo_sapiens 0 261
ENST00000482863 PCOLCE-005 retained_intron Homo_sapiens 0 244
ENST00000487172 PCOLCE-006 retained_intron Homo_sapiens 0 195
ENST00000496269 PCOLCE-002 processed_transcript Homo_sapiens 0 603

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