C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: procollagen C-endopeptidase enhancer protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031731 Pcolce-001 ENSMUSG00000029718 10090 - 5:137605103-137611487 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031731
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031731 43.706±7.53 601.495±40.55 136.743±7.66 4.293±3.67 66.572±5.28 38.974±4.25 31.311±7.62 57.060±5.11 8.220±3.55 105.703±8.10 9.680±3.28 136.886±41.95 19.968±15.41 24.691±1.81

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005518 ISO collagen binding
GO:0005615 IEA extracellular space
GO:0006508 IDA proteolysis
GO:0008201 ISO heparin binding
GO:0010952 IEA positive regulation of peptidase activity
GO:0016504 ISO peptidase activator activity
GO:0031012 IEA extracellular matrix
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223061 PCOLCE-001 protein_coding Homo_sapiens 0 924
ENST00000462260 PCOLCE-004 retained_intron Homo_sapiens 0 335
ENST00000482863 PCOLCE-005 retained_intron Homo_sapiens 0 244
ENST00000487172 PCOLCE-006 retained_intron Homo_sapiens 0 351
ENST00000496269 PCOLCE-002 processed_transcript Homo_sapiens 0 486

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