C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial assembly of ribosomal large subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029815 Malsu1 10090 + 6:49073795-49086751 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031839 Malsu1-201 49073795-49084717 protein_coding
  ENSMUST00000114500 Malsu1-002 49073848-49086751 protein_coding
  ENSMUST00000128616 Malsu1-001 49073795-49086751 protein_coding
  ENSMUST00000139726 Malsu1-003 49082585-49084678 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031839ENSMUST00000128616ENSMUST00000139726
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031839 23.997±1.15 51.180±12.06 27.558±0.00 23.464±6.76 36.105±17.07 26.956±2.10 16.059±1.08 25.667±7.81 19.606±5.82 20.720±2.85 38.516±1.98 42.034±8.95 37.528±18.82 50.985±0.00
ENSMUST00000128616 N/A N/A N/A N/A 0.381±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.329±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059M CIL_00059M_0002 CGP 6:49036518-49086751
CIL_0003DP CIL_0003DP_0002 CGP 6:49073795-49214954

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 ISS mitochondrion
GO:0042273 ISS ribosomal large subunit biogenesis
GO:0070130 IEA negative regulation of mitochondrial translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091079 MALSU1 mitochondrial assembly of ribosomal large subunit 1 protein_coding Danio_rerio
ENSG00000156928 MALSU1 mitochondrial assembly of ribosomal large subunit 1 protein_coding Homo_sapiens

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