C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial assembly of ribosomal large subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156928 MALSU1 9606 + 7:23298739-23311729 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000287543 MALSU1-005 23299339-23307990 retained_intron
  ENST00000466681 MALSU1-001 23299200-23311729 protein_coding
  ENST00000476623 MALSU1-004 23307691-23309575 retained_intron
  ENST00000479974 MALSU1-002 23298739-23300924 processed_transcript
  ENST00000481564 MALSU1-003 23299341-23301195 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287543ENST00000466681ENST00000476623ENST00000481564
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287543 18.134±0.00 20.389±0.00 0.471±0.00 11.771±8.39 10.486±9.40 14.514±0.00 17.213±11.75 9.682±6.79 23.876±0.00 14.177±0.00 26.759±2.06 29.437±6.31 30.695±0.00 29.265±3.66
ENST00000466681 N/A N/A 0.125±0.00 0.271±0.00 N/A 0.313±0.00 N/A N/A N/A N/A N/A 0.560±0.00 N/A N/A
ENST00000476623 7.603±0.00 11.859±0.00 N/A 6.799±4.26 8.020±0.00 3.950±2.09 6.380±4.18 6.824±3.28 11.469±0.00 4.272±0.77 10.666±0.00 18.438±0.00 N/A 10.248±0.00
ENST00000481564 N/A N/A 0.435±0.00 N/A 1.862±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059M CIL_00059M_0001 CGP 7:23235967-23311729
CIL_0003DP CIL_0003DP_0001 CGP 7:23298739-23470467

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0042273 IMP ribosomal large subunit biogenesis
GO:0070130 IDA negative regulation of mitochondrial translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091079 MALSU1 mitochondrial assembly of ribosomal large subunit 1 protein_coding Danio_rerio
ENSMUSG00000029815 Malsu1 mitochondrial assembly of ribosomal large subunit 1 protein_coding Mus_musculus

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