C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pleiotrophin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029838 Ptn 10090 - 6:36715663-36811361 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000101534 Ptn-201 36715663-36811361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000101534
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000101534 7.608±7.07 8.245±0.71 53.315±6.02 10.158±3.60 5.958±1.09 0.855±0.13 0.968±0.17 0.558±0.50 0.532±0.18 0.227±0.06 6.150±0.98 0.452±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023Q CIL_00023Q_0003 CGP 6:36388084-36811361
CIL_0002Q6 CIL_0002Q6_0002 CGP 6:36715663-37300184

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001503 IDA ossification
GO:0005578 TAS proteinaceous extracellular matrix
GO:0005783 IEA endoplasmic reticulum
GO:0007612 IMP learning
GO:0008083 IEA growth factor activity
GO:0008201 IEA heparin binding
GO:0030282 IDA bone mineralization
GO:0051781 IEA positive regulation of cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045798 ptn pleiotrophin protein_coding Danio_rerio
ENSG00000105894 PTN pleiotrophin protein_coding Homo_sapiens

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