C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002Q6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105894-ENSG00000157680 CGP 9606 7:137227341-137847092
GeneTranscriptPositionBiotype
ENSG00000105894 (PTN)
pleiotrophin 		ENST00000348225 (PTN-001) 137227341-137343865 protein_coding
ENST00000393083 (PTN-002) 137227364-137343774 protein_coding
ENSG00000157680 (DGKI)
diacylglycerol kinase, iota 		ENST00000288490 (DGKI-001) 137390524-137846863 protein_coding
ENST00000424189 (DGKI-014) 137390524-137847092 protein_coding
ENST00000446122 (DGKI-003) 137390524-137847092 protein_coding
ENST00000453654 (DGKI-002) 137381037-137846536 protein_coding
ENST00000460662 (DGKI-005) 137463489-137581928 processed_transcript
ENST00000470895 (DGKI-008) 137585261-137847092 processed_transcript
ENST00000475388 (DGKI-010) 137771599-137774649 processed_transcript
ENST00000477835 (DGKI-012) 137391038-137454873 processed_transcript
ENST00000483619 (DGKI-009) 137678607-137774990 processed_transcript
ENST00000486153 (DGKI-013) 137391085-137395973 retained_intron
ENST00000494390 (DGKI-006) 137388817-137453194 processed_transcript
ENST00000497321 (DGKI-011) 137391155-137466035 processed_transcript
ENST00000614521 (DGKI-201) 137391220-137690004 protein_coding
ENSG00000228031 (AC078842.3)
 ENST00000438969 (AC078842.3-001) 137344930-137354483 lincRNA
ENSG00000230383 (AC009245.3)
 ENST00000456481 (AC009245.3-001) 137721985-137722846 processed_pseudogene
ENSG00000231114 (AC078842.4)
 ENST00000447529 (AC078842.4-001) 137318592-137326953 lincRNA
ENST00000448365 (AC078842.4-002) 137324743-137325817 lincRNA
ENSG00000279483 (RPL41)
ribosomal protein L41 		ENST00000623936 (RPL41-203) 137513832-137514238 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0002Q6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029838-ENSMUSG00000038665 CGP 10090 6:36715663-37300184
GeneTranscriptPositionBiotype
ENSMUSG00000029837 (1700111E14Rik)
RIKEN cDNA 1700111E14 gene 		ENSMUST00000031863 (1700111E14Rik-001) 36937048-36985784 antisense
ENSMUSG00000029838 (Ptn)
pleiotrophin 		ENSMUST00000101534 (Ptn-201) 36715663-36811361 protein_coding
ENSMUSG00000038665 (Dgki)
diacylglycerol kinase, iota 		ENSMUST00000042075 (Dgki-002) 36847156-37299637 protein_coding
ENSMUST00000090314 (Dgki-005) 36846981-37300184 protein_coding
ENSMUST00000101532 (Dgki-001) 36846022-37299974 protein_coding
ENSMUST00000136457 (Dgki-007) 37231044-37299744 processed_transcript
ENSMUST00000138286 (Dgki-004) 36846981-37300184 nonsense_mediated_decay
ENSMUST00000143046 (Dgki-006) 36911467-37031028 processed_transcript
ENSMUST00000146656 (Dgki-008) 37034608-37064510 processed_transcript
ENSMUST00000150300 (Dgki-003) 36846981-37300184 nonsense_mediated_decay
ENSMUSG00000058661 (Gm7452)
predicted pseudogene 7452 		ENSMUST00000108332 (Gm7452-201) 36956644-36960417 pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Q6_0001ENSG00000105894ENST00000348225ENST00000393083ENSG00000157680ENST00000288490ENST00000424189ENST00000446122ENST00000453654ENST00000460662ENST00000470895ENST00000475388ENST00000477835ENST00000483619ENST00000486153ENST00000494390ENST00000497321ENST00000614521ENSG00000228031ENST00000438969ENSG00000230383ENST00000456481ENSG00000231114ENST00000447529ENST00000448365ENSG00000279483ENST00000623936CIL_0002Q6_0002ENSMUSG00000029837ENSMUST00000031863ENSMUSG00000029838ENSMUST00000101534ENSMUSG00000038665ENSMUST00000042075ENSMUST00000090314ENSMUST00000101532ENSMUST00000136457ENSMUST00000138286ENSMUST00000143046ENSMUST00000146656ENSMUST00000150300ENSMUSG00000058661ENSMUST00000108332
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Q6_0001ENSG00000105894ENST00000348225ENST00000393083ENSG00000157680ENST00000288490ENST00000424189ENST00000453654ENST00000460662ENST00000494390ENST00000497321ENST00000614521ENSG00000228031ENST00000438969ENSG00000230383ENST00000456481ENSG00000231114ENST00000447529ENST00000448365ENSG00000279483ENST00000623936CIL_0002Q6_0002ENSMUSG00000029837ENSMUST00000031863ENSMUSG00000029838ENSMUST00000101534ENSMUSG00000038665ENSMUST00000042075ENSMUST00000090314ENSMUST00000101532ENSMUST00000136457ENSMUST00000138286ENSMUST00000143046ENSMUST00000150300ENSMUSG00000058661ENSMUST00000108332
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105894 ENST00000348225 0.208±0.00 3.807±0.00 2.143±0.00 30.256±8.06 3.744±2.12 9.867±7.81 8.069±5.04 4.271±3.45 2.633±2.13 8.856±5.85 0.508±0.00 4.898±2.92 16.377±6.96 33.558±8.08
ENST00000393083 N/A N/A N/A N/A N/A N/A 0.467±0.00 N/A N/A N/A 0.195±0.00 N/A N/A N/A
ENSG00000157680 ENST00000288490 N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A 0.120±0.00 N/A N/A
ENST00000424189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.429±0.00
ENST00000446122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453654 N/A N/A N/A N/A N/A 0.101±0.00 N/A N/A 0.002±0.00 N/A 0.016±0.00 N/A 0.011±0.00 N/A
ENST00000460662 N/A N/A N/A 12.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494390 0.017±0.00 N/A N/A N/A N/A N/A 0.082±0.00 N/A 0.018±0.00 0.066±0.00 N/A 0.079±0.00 0.029±0.00 0.091±0.00
ENST00000497321 N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000614521 0.074±0.00 N/A N/A 5.238±0.00 N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A 0.352±0.00
ENSG00000228031 ENST00000438969 N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00
ENSG00000230383 ENST00000456481 N/A 0.325±0.00 N/A 0.139±0.06 N/A 0.136±0.00 0.016±0.00 0.416±0.25 0.046±0.00 0.070±0.00 0.157±0.00 0.073±0.01 0.024±0.00 0.084±0.06
ENSG00000231114 ENST00000447529 N/A N/A N/A 0.045±0.01 0.122±0.00 N/A 0.020±0.00 N/A 0.109±0.00 0.073±0.00 N/A N/A N/A 0.044±0.00
ENST00000448365 N/A N/A 0.106±0.00 N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A N/A N/A 0.745±0.34
ENSG00000279483 ENST00000623936 0.045±0.00 0.284±0.00 N/A N/A N/A 0.180±0.00 N/A 0.177±0.00 0.183±0.00 0.046±0.00 0.874±0.00 1.044±0.26 N/A 0.130±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029837 ENSMUST00000031863 N/A N/A 0.027±0.00 0.084±0.03 0.216±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.17
ENSMUSG00000029838 ENSMUST00000101534 7.608±7.07 8.245±0.71 N/A 53.315±6.02 10.158±3.60 5.958±1.09 0.855±0.13 0.968±0.17 0.558±0.50 0.532±0.18 0.227±0.06 6.150±0.98 N/A 0.452±0.08
ENSMUSG00000038665 ENSMUST00000042075 N/A N/A N/A 2.384±0.00 N/A N/A 0.062±0.00 0.025±0.02 0.020±0.01 N/A 0.018±0.00 0.126±0.07 0.022±0.00 0.075±0.00
ENSMUST00000090314 0.504±0.15 0.204±0.04 N/A N/A N/A 0.486±0.00 N/A N/A 0.033±0.01 0.027±0.01 N/A 0.150±0.10 N/A 0.067±0.04
ENSMUST00000101532 0.138±0.14 0.348±0.21 N/A 1.559±0.00 N/A 0.201±0.09 0.019±0.01 0.026±0.00 0.010±0.00 0.051±0.02 0.005±0.00 0.207±0.10 0.035±0.00 0.078±0.04
ENSMUST00000136457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.492±0.00 N/A N/A
ENSMUST00000138286 N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A N/A 0.052±0.00 N/A 0.071±0.05 N/A N/A
ENSMUST00000143046 N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A 0.014±0.00 N/A 0.024±0.00 0.152±0.12 N/A N/A
ENSMUST00000146656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150300 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000058661 ENSMUST00000108332 0.195±0.11 0.063±0.02 0.577±0.07 0.879±0.03 0.268±0.07 0.156±0.11 0.168±0.04 0.171±0.04 0.204±0.09 0.284±0.06 0.379±0.05 0.409±0.40 0.616±0.06 0.843±0.49

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