C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: activating transcription factor 7 interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030213 Atf7ip 10090 + 6:136518802-136611038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032335 Atf7ip-001 136518802-136611038 protein_coding
  ENSMUST00000185332 Atf7ip-004 136595586-136608319 retained_intron
  ENSMUST00000185724 Atf7ip-002 136518806-136563769 protein_coding
  ENSMUST00000185936 Atf7ip-006 136518846-136524397 retained_intron
  ENSMUST00000186577 Atf7ip-007 136518841-136582464 protein_coding
  ENSMUST00000186742 Atf7ip-008 136551187-136559910 protein_coding
  ENSMUST00000187429 Atf7ip-003 136532927-136587668 protein_coding
  ENSMUST00000188805 Atf7ip-005 136577579-136582411 retained_intron
  ENSMUST00000189535 Atf7ip-009 136554004-136560093 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032335ENSMUST00000185332ENSMUST00000187429
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032335 5.874±2.99 6.311±0.39 7.826±3.37 14.105±7.78 9.100±3.27 5.118±0.71 7.132±0.43 3.459±1.16 3.556±2.49 12.292±2.78 3.520±0.47 8.145±2.37 4.136±1.26 3.416±1.32
ENSMUST00000185332 3.703±0.37 7.366±1.86 N/A N/A 14.285±6.66 4.952±0.71 2.761±0.30 3.227±0.00 1.510±0.14 10.651±1.81 N/A 13.671±4.66 N/A 3.294±0.05
ENSMUST00000187429 7.791±0.00 11.890±2.52 N/A N/A 11.292±1.64 6.305±0.00 N/A 2.838±0.32 1.922±0.17 6.672±0.00 N/A 11.567±0.00 7.800±2.40 4.169±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096F CIL_00096F_0002 VISTA 6:136167244-136769677
CIL_00082T CIL_00082T_0002 VISTA 6:136168119-136771874
CIL_0003H6 CIL_0003H6_0002 CGP 6:136518802-136661928

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IDA transcription corepressor activity
GO:0005634 ISS nucleus
GO:0005667 IDA transcription factor complex
GO:0006200 IDA ATP catabolic process
GO:0006306 ISS DNA methylation
GO:0006351 IEA transcription, DNA-templated
GO:0016887 IDA ATPase activity
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0045898 ISS regulation of RNA polymerase II transcriptional preinitiation complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069619 atf7ip activating transcription factor 7 interacting protein protein_coding Danio_rerio
ENSG00000171681 ATF7IP activating transcription factor 7 interacting protein protein_coding Homo_sapiens

Loading