C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: activating transcription factor 7 interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171681 ATF7IP 9606 + 12:14365632-14502935 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261168 ATF7IP-201 14365632-14502935 protein_coding
  ENST00000396279 ATF7IP-018 14419188-14425461 protein_coding
  ENST00000428217 ATF7IP-023 14419164-14424291 protein_coding
  ENST00000534828 ATF7IP-011 14367363-14424371 protein_coding
  ENST00000535132 ATF7IP-009 14367373-14424224 protein_coding
  ENST00000535179 ATF7IP-007 14466110-14476154 retained_intron
  ENST00000535738 ATF7IP-008 14478336-14481906 protein_coding
  ENST00000536279 ATF7IP-015 14419211-14424183 protein_coding
  ENST00000536444 ATF7IP-001 14365729-14502931 protein_coding
  ENST00000537653 ATF7IP-003 14365677-14476432 retained_intron
  ENST00000538511 ATF7IP-021 14365684-14447030 protein_coding
  ENST00000539057 ATF7IP-014 14416913-14424445 protein_coding
  ENST00000539659 ATF7IP-026 14365676-14460567 processed_transcript
  ENST00000540793 ATF7IP-024 14423761-14498247 protein_coding
  ENST00000541056 ATF7IP-013 14408490-14424423 protein_coding
  ENST00000541654 ATF7IP-027 14385316-14461021 processed_transcript
  ENST00000542508 ATF7IP-016 14419971-14424012 protein_coding
  ENST00000542514 ATF7IP-022 14419193-14424312 protein_coding
  ENST00000542967 ATF7IP-010 14367324-14424443 protein_coding
  ENST00000542991 ATF7IP-012 14394863-14424092 protein_coding
  ENST00000543189 ATF7IP-004 14365693-14482653 protein_coding
  ENST00000544627 ATF7IP-002 14385064-14498763 protein_coding
  ENST00000545723 ATF7IP-020 14365688-14438247 protein_coding
  ENST00000545769 ATF7IP-019 14419136-14424421 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261168ENST00000536444ENST00000537653ENST00000538511ENST00000539659ENST00000540793ENST00000543189ENST00000544627
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261168 2.838±0.00 3.072±0.00 2.741±0.00 1.501±0.66 1.663±0.00 1.826±0.21 N/A 1.200±0.00 2.303±1.67 6.910±0.00 1.380±0.00 4.120±1.01 2.106±1.30 3.783±0.00
ENST00000536444 2.065±0.00 N/A N/A 0.554±0.00 1.485±0.00 1.726±0.00 0.725±0.00 2.241±0.00 N/A 0.848±0.00 1.686±0.00 3.792±0.00 1.317±0.00 4.190±0.00
ENST00000537653 N/A N/A N/A 1.390±0.00 3.258±0.00 2.554±0.00 N/A N/A N/A 3.343±0.00 N/A N/A N/A N/A
ENST00000538511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.347±0.00 7.651±0.00 43.454±0.00
ENST00000539659 N/A N/A N/A 1.854±0.00 N/A N/A N/A 2.010±0.00 N/A N/A N/A N/A N/A N/A
ENST00000540793 N/A N/A N/A N/A N/A N/A 2.178±0.00 N/A N/A 1.779±0.00 2.814±0.00 N/A 1.610±0.00 10.085±0.12
ENST00000543189 N/A N/A N/A N/A 2.780±0.00 2.605±0.00 1.782±0.00 N/A 2.243±0.00 3.384±0.00 N/A 2.866±0.00 N/A N/A
ENST00000544627 N/A N/A 1.545±0.00 N/A N/A N/A 1.377±0.00 1.789±0.00 N/A N/A N/A 2.833±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XF CIL_0006XF_0002 CGP 12:13537337-14502935
CIL_00096F CIL_00096F_0001 VISTA 12:13956439-14558986
CIL_00082T CIL_00082T_0001 VISTA 12:13957329-14561410
CIL_0003H6 CIL_0003H6_0001 CGP 12:14365632-14568349

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IEA transcription corepressor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005667 IEA transcription factor complex
GO:0006200 IEA ATP catabolic process
GO:0006306 IDA DNA methylation
GO:0006351 IEA transcription, DNA-templated
GO:0016032 IEA viral process
GO:0016887 IEA ATPase activity
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045898 IDA regulation of RNA polymerase II transcriptional preinitiation complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069619 atf7ip activating transcription factor 7 interacting protein protein_coding Danio_rerio
ENSMUSG00000030213 Atf7ip activating transcription factor 7 interacting protein protein_coding Mus_musculus

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