C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00096F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm256 VISTA 9606 12:13956439-14558986
GeneTranscriptPositionBiotype
ENSG00000121316 (PLBD1)
phospholipase B domain containing 1 		ENST00000240617 (PLBD1-001) 14503661-14568349 protein_coding
ENST00000540572 (PLBD1-003) 14536694-14554246 protein_coding
ENST00000541618 (PLBD1-002) 14511511-14567728 nonsense_mediated_decay
ENST00000541800 (PLBD1-004) 14511260-14536125 retained_intron
ENSG00000171681 (ATF7IP)
activating transcription factor 7 interacting protein 		ENST00000261168 (ATF7IP-201) 14365632-14502935 protein_coding
ENST00000396279 (ATF7IP-018) 14419188-14425461 protein_coding
ENST00000428217 (ATF7IP-023) 14419164-14424291 protein_coding
ENST00000534828 (ATF7IP-011) 14367363-14424371 protein_coding
ENST00000535132 (ATF7IP-009) 14367373-14424224 protein_coding
ENST00000535179 (ATF7IP-007) 14466110-14476154 retained_intron
ENST00000535738 (ATF7IP-008) 14478336-14481906 protein_coding
ENST00000536279 (ATF7IP-015) 14419211-14424183 protein_coding
ENST00000536444 (ATF7IP-001) 14365729-14502931 protein_coding
ENST00000537653 (ATF7IP-003) 14365677-14476432 retained_intron
ENST00000538511 (ATF7IP-021) 14365684-14447030 protein_coding
ENST00000539057 (ATF7IP-014) 14416913-14424445 protein_coding
ENST00000539659 (ATF7IP-026) 14365676-14460567 processed_transcript
ENST00000540793 (ATF7IP-024) 14423761-14498247 protein_coding
ENST00000541056 (ATF7IP-013) 14408490-14424423 protein_coding
ENST00000541654 (ATF7IP-027) 14385316-14461021 processed_transcript
ENST00000542508 (ATF7IP-016) 14419971-14424012 protein_coding
ENST00000542514 (ATF7IP-022) 14419193-14424312 protein_coding
ENST00000542967 (ATF7IP-010) 14367324-14424443 protein_coding
ENST00000542991 (ATF7IP-012) 14394863-14424092 protein_coding
ENST00000543189 (ATF7IP-004) 14365693-14482653 protein_coding
ENST00000544627 (ATF7IP-002) 14385064-14498763 protein_coding
ENST00000545723 (ATF7IP-020) 14365688-14438247 protein_coding
ENST00000545769 (ATF7IP-019) 14419136-14424421 protein_coding
ENSG00000200830 (RN7SKP134)
RNA, 7SK small nuclear pseudogene 134 		ENST00000363960 (RN7SKP134-201) 14553702-14553970 misc_RNA
ENSG00000227760 (RP11-298E10.1)
 ENST00000544546 (RP11-298E10.1-001) 14192002-14192284 processed_pseudogene
ENSG00000255649 (RP11-502N13.2)
 ENST00000544122 (RP11-502N13.2-001) 14530151-14533229 antisense
ENSG00000255749 (GNAI2P1)
guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 pseudogene 1 		ENST00000541815 (GNAI2P1-001) 14254912-14255226 processed_pseudogene
ENSG00000256084 (RP11-134N1.2)
 ENST00000538329 (RP11-134N1.2-001) 14216590-14221297 lincRNA
ENSG00000273079 (GRIN2B)
glutamate receptor, ionotropic, N-methyl D-aspartate 2B 		ENST00000609686 (GRIN2B-001) 13537337-13980119 protein_coding
CIL_00096F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm256 VISTA 10090 6:136167244-136769677
GeneTranscriptPositionBiotype
ENSMUSG00000030209 (Grin2b)
glutamate receptor, ionotropic, NMDA2B (epsilon 2) 		ENSMUST00000053880 (Grin2b-001) 135713232-136171722 protein_coding
ENSMUST00000111905 (Grin2b-201) 135729826-136173511 protein_coding
ENSMUST00000125905 (Grin2b-004) 136044196-136173511 protein_coding
ENSMUST00000143943 (Grin2b-003) 136044196-136173511 protein_coding
ENSMUST00000152012 (Grin2b-002) 135869703-136173511 processed_transcript
ENSMUST00000188999 (Grin2b-005) 136044203-136171889 protein_coding
ENSMUSG00000030213 (Atf7ip)
activating transcription factor 7 interacting protein 		ENSMUST00000032335 (Atf7ip-001) 136518802-136611038 protein_coding
ENSMUST00000185332 (Atf7ip-004) 136595586-136608319 retained_intron
ENSMUST00000185724 (Atf7ip-002) 136518806-136563769 protein_coding
ENSMUST00000185936 (Atf7ip-006) 136518846-136524397 retained_intron
ENSMUST00000186577 (Atf7ip-007) 136518841-136582464 protein_coding
ENSMUST00000186742 (Atf7ip-008) 136551187-136559910 protein_coding
ENSMUST00000187429 (Atf7ip-003) 136532927-136587668 protein_coding
ENSMUST00000188805 (Atf7ip-005) 136577579-136582411 retained_intron
ENSMUST00000189535 (Atf7ip-009) 136554004-136560093 protein_coding
ENSMUSG00000030214 (Plbd1)
phospholipase B domain containing 1 		ENSMUST00000032336 (Plbd1-001) 136612070-136661928 protein_coding
ENSMUST00000133911 (Plbd1-003) 136613876-136634558 retained_intron
ENSMUST00000137139 (Plbd1-002) 136613303-136661873 retained_intron
ENSMUSG00000042638 (Gucy2c)
guanylate cyclase 2c 		ENSMUST00000032338 (Gucy2c-001) 136697285-136781765 protein_coding
ENSMUST00000078095 (Gucy2c-002) 136697285-136781742 protein_coding
ENSMUSG00000045291 (E330021D16Rik)
RIKEN cDNA E330021D16 gene 		ENSMUST00000058713 (E330021D16Rik-201) 136400715-136401830 protein_coding
ENSMUSG00000071141 (Rpl36a-ps3)
ribosomal protein L36A, pseudogene 3 		ENSMUST00000120093 (Rpl36a-ps3-001) 136488807-136489127 processed_pseudogene
ENSMUSG00000083916 (Gm15476)
predicted gene 15476 		ENSMUST00000118247 (Gm15476-001) 136383838-136384837 processed_pseudogene
ENSMUSG00000091408 (Gm6728)
predicted gene 6728 		ENSMUST00000178117 (Gm6728-001) 136486122-136487186 processed_pseudogene
ENSMUSG00000094973 (Gm8994)
predicted gene 8994 		ENSMUST00000077886 (Gm8994-201) 136328543-136329778 protein_coding
ENSMUSG00000097496 (Gm26653)
predicted gene, 26653 		ENSMUST00000181537 (Gm26653-001) 136173061-136175664 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00096F_0001ENSG00000121316ENST00000240617ENST00000541618ENSG00000171681ENST00000261168ENST00000536444ENST00000537653ENST00000538511ENST00000539659ENST00000540793ENST00000543189ENST00000544627ENSG00000200830ENST00000363960ENSG00000227760ENST00000544546ENSG00000255649ENST00000544122ENSG00000255749ENST00000541815ENSG00000256084ENST00000538329ENSG00000273079ENST00000609686CIL_00096F_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000121316 ENST00000240617 N/A 3.156±0.00 1.611±0.00 0.336±0.00 6.474±2.07 4.787±0.00 2.355±1.20 N/A 3.493±1.98 6.793±0.00 1.036±0.58 15.826±12.60 4.183±1.62 3.312±0.00
ENST00000540572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541618 N/A N/A N/A 0.545±0.26 N/A N/A N/A 10.022±0.00 N/A N/A N/A N/A N/A N/A
ENST00000541800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171681 ENST00000261168 2.838±0.00 3.072±0.00 2.741±0.00 1.501±0.66 1.663±0.00 1.826±0.21 N/A 1.200±0.00 2.303±1.67 6.910±0.00 1.380±0.00 4.120±1.01 2.106±1.30 3.783±0.00
ENST00000396279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536444 2.065±0.00 N/A N/A 0.554±0.00 1.485±0.00 1.726±0.00 0.725±0.00 2.241±0.00 N/A 0.848±0.00 1.686±0.00 3.792±0.00 1.317±0.00 4.190±0.00
ENST00000537653 N/A N/A N/A 1.390±0.00 3.258±0.00 2.554±0.00 N/A N/A N/A 3.343±0.00 N/A N/A N/A N/A
ENST00000538511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.347±0.00 7.651±0.00 43.454±0.00
ENST00000539057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539659 N/A N/A N/A 1.854±0.00 N/A N/A N/A 2.010±0.00 N/A N/A N/A N/A N/A N/A
ENST00000540793 N/A N/A N/A N/A N/A N/A 2.178±0.00 N/A N/A 1.779±0.00 2.814±0.00 N/A 1.610±0.00 10.085±0.12
ENST00000541056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543189 N/A N/A N/A N/A 2.780±0.00 2.605±0.00 1.782±0.00 N/A 2.243±0.00 3.384±0.00 N/A 2.866±0.00 N/A N/A
ENST00000544627 N/A N/A 1.545±0.00 N/A N/A N/A 1.377±0.00 1.789±0.00 N/A N/A N/A 2.833±0.00 N/A N/A
ENST00000545723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200830 ENST00000363960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.235±0.00 N/A N/A
ENSG00000227760 ENST00000544546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00
ENSG00000255649 ENST00000544122 N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A 0.919±0.00 N/A N/A N/A 9.563±0.44
ENSG00000255749 ENST00000541815 0.100±0.00 N/A N/A 0.056±0.00 0.057±0.00 N/A N/A N/A N/A N/A N/A 0.094±0.00 N/A 0.300±0.16
ENSG00000256084 ENST00000538329 N/A 0.367±0.00 N/A 0.084±0.00 0.075±0.00 0.094±0.00 N/A 0.123±0.00 N/A 0.192±0.00 N/A 0.167±0.11 0.100±0.03 0.155±0.00
ENSG00000273079 ENST00000609686 0.021±0.00 0.213±0.00 0.032±0.00 5.611±0.00 0.261±0.23 0.019±0.01 0.007±0.00 0.027±0.00 N/A 0.020±0.01 0.025±0.02 0.198±0.19 0.003±0.00 0.072±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030209 ENSMUST00000053880 0.047±0.02 0.010±0.00 0.001±0.00 5.354±3.71 0.012±0.01 0.026±0.01 0.005±0.00 0.002±0.00 0.004±0.00 0.014±0.01 0.002±0.00 0.197±0.07 0.002±0.00 N/A
ENSMUST00000111905 N/A N/A 0.003±0.00 N/A N/A 0.032±0.00 N/A 0.017±0.02 0.022±0.02 0.009±0.01 N/A 0.092±0.03 0.003±0.00 2.913±1.64
ENSMUST00000125905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152012 N/A 0.024±0.00 0.002±0.00 N/A 0.064±0.05 0.064±0.04 N/A N/A N/A 0.128±0.00 N/A 0.449±0.15 N/A N/A
ENSMUST00000188999 N/A N/A N/A N/A N/A 0.723±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030213 ENSMUST00000032335 5.874±2.99 6.311±0.39 7.826±3.37 14.105±7.78 9.100±3.27 5.118±0.71 7.132±0.43 3.459±1.16 3.556±2.49 12.292±2.78 3.520±0.47 8.145±2.37 4.136±1.26 3.416±1.32
ENSMUST00000185332 3.703±0.37 7.366±1.86 N/A N/A 14.285±6.66 4.952±0.71 2.761±0.30 3.227±0.00 1.510±0.14 10.651±1.81 N/A 13.671±4.66 N/A 3.294±0.05
ENSMUST00000185724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187429 7.791±0.00 11.890±2.52 N/A N/A 11.292±1.64 6.305±0.00 N/A 2.838±0.32 1.922±0.17 6.672±0.00 N/A 11.567±0.00 7.800±2.40 4.169±0.39
ENSMUST00000188805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030214 ENSMUST00000032336 23.244±7.95 7.534±1.67 5.888±1.12 0.155±0.08 26.362±5.02 28.167±4.14 13.250±1.03 9.680±0.84 11.212±5.91 12.033±1.70 8.079±0.92 16.174±4.80 59.118±34.65 15.421±4.95
ENSMUST00000133911 N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137139 N/A 1.015±0.00 N/A 0.075±0.00 N/A N/A N/A N/A N/A 1.769±0.00 N/A 2.565±0.00 N/A N/A
ENSMUSG00000042638 ENSMUST00000032338 N/A N/A N/A 0.182±0.10 N/A 46.846±9.31 N/A N/A 0.237±0.16 N/A N/A 0.078±0.06 0.602±0.48 0.109±0.06
ENSMUST00000078095 0.029±0.01 N/A 0.020±0.00 N/A 0.033±0.01 6.681±0.00 0.007±0.00 0.012±0.00 0.116±0.02 0.052±0.04 0.013±0.00 0.046±0.03 0.254±0.00 0.096±0.02
ENSMUSG00000045291 ENSMUST00000058713 N/A N/A N/A N/A N/A N/A 0.071±0.00 0.318±0.10 0.060±0.03 0.065±0.02 N/A 8.712±1.71 0.279±0.14 0.705±0.30
ENSMUSG00000071141 ENSMUST00000120093 N/A N/A 0.208±0.15 4.031±5.46 0.361±0.00 N/A N/A 0.229±0.00 8.265±21.12 N/A 0.627±0.48 N/A 0.150±0.09 0.241±0.01
ENSMUSG00000083916 ENSMUST00000118247 N/A 0.086±0.00 N/A N/A N/A N/A N/A 0.104±0.06 0.021±0.01 0.048±0.00 N/A 0.340±0.18 0.087±0.03 0.041±0.00
ENSMUSG00000091408 ENSMUST00000178117 0.051±0.02 0.180±0.07 0.075±0.02 0.172±0.18 0.103±0.06 0.515±0.37 0.071±0.04 0.085±0.05 0.021±0.02 0.094±0.05 N/A 0.196±0.09 0.100±0.06 0.836±0.39
ENSMUSG00000094973 ENSMUST00000077886 0.027±0.00 N/A 0.007±0.00 0.003±0.00 N/A 0.042±0.00 N/A 0.040±0.01 0.005±0.00 N/A N/A N/A N/A 0.027±0.00
ENSMUSG00000097496 ENSMUST00000181537 N/A N/A N/A N/A N/A 0.132±0.01 N/A N/A N/A N/A N/A N/A N/A N/A

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