C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: basic helix-loop-helix family, member e41
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030256 Bhlhe41 10090 - 6:145858243-145865558 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032386 Bhlhe41-001 145858243-145865558 protein_coding
  ENSMUST00000111703 Bhlhe41-002 145863505-145865302 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032386ENSMUST00000111703
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032386 1.442±0.37 15.610±5.28 8.100±0.00 1.927±2.29 13.193±12.05 1.162±0.36 1.586±0.17 0.715±0.22 0.076±0.05 3.689±1.08 7.259±2.55 4.165±1.75 8.547±2.75 0.333±0.10
ENSMUST00000111703 N/A N/A N/A 17.660±0.00 N/A N/A N/A N/A 0.082±0.05 N/A N/A 5.670±2.16 30.180±17.98 1.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X8 CIL_0004X8_0002 CGP 6:145746748-145865558
CIL_0004X9 CIL_0004X9_0002 CGP 6:145858243-145965223

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001102 IPI RNA polymerase II activating transcription factor binding
GO:0001191 IDA RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription
GO:0003705 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0003714 TAS transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0007623 IEP circadian rhythm
GO:0010832 IDA negative regulation of myotube differentiation
GO:0010944 IDA negative regulation of transcription by competitive promoter binding
GO:0017053 TAS transcriptional repressor complex
GO:0032922 IMP circadian regulation of gene expression
GO:0042803 IPI protein homodimerization activity
GO:0042826 IDA histone deacetylase binding
GO:0043425 IPI bHLH transcription factor binding
GO:0043426 IDA MRF binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046982 IPI protein heterodimerization activity
GO:0046983 IEA protein dimerization activity
GO:0070888 IDA E-box binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041691 bhlhe41 basic helix-loop-helix family, member e41 protein_coding Danio_rerio
ENSG00000123095 BHLHE41 basic helix-loop-helix family, member e41 protein_coding Homo_sapiens

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