C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004X9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123095-ENSG00000123096 CGP 9606 12:26120026-26299290
GeneTranscriptPositionBiotype
ENSG00000123095 (BHLHE41)
basic helix-loop-helix family, member e41 		ENST00000242728 (BHLHE41-001) 26120026-26125127 protein_coding
ENST00000394326 (BHLHE41-003) 26122958-26123768 retained_intron
ENST00000541271 (BHLHE41-002) 26123988-26124899 retained_intron
ENSG00000123096 (SSPN)
sarcospan 		ENST00000242729 (SSPN-001) 26195496-26232955 protein_coding
ENST00000422622 (SSPN-003) 26195340-26234779 protein_coding
ENST00000534829 (SSPN-005) 26122052-26299290 processed_transcript
ENST00000535504 (SSPN-008) 26195673-26252920 protein_coding
ENST00000538142 (SSPN-007) 26121991-26231014 protein_coding
ENST00000539019 (SSPN-002) 26134964-26181284 processed_transcript
ENST00000540266 (SSPN-009) 26134967-26231146 protein_coding
ENST00000544231 (SSPN-006) 26195356-26287738 processed_transcript
ENSG00000256234 (RP11-283G6.4)
 ENST00000540392 (RP11-283G6.4-001) 26211164-26335856 antisense
ENSG00000256894 (RP11-283G6.3)
 ENST00000535914 (RP11-283G6.3-001) 26125155-26126084 antisense
ENST00000545819 (RP11-283G6.3-002) 26125313-26126617 antisense
ENSG00000278095 (RP11-283G6.6)
 ENST00000621404 (RP11-283G6.6-001) 26273329-26273900 antisense
CIL_0004X9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030256-ENSMUSG00000030255 CGP 10090 6:145858243-145965223
GeneTranscriptPositionBiotype
ENSMUSG00000030255 (Sspn)
sarcospan 		ENSMUST00000032383 (Sspn-001) 145934122-145965223 protein_coding
ENSMUST00000111701 (Sspn-003) 145953429-145965223 protein_coding
ENSMUST00000111702 (Sspn-002) 145931641-145965223 protein_coding
ENSMUSG00000030256 (Bhlhe41)
basic helix-loop-helix family, member e41 		ENSMUST00000032386 (Bhlhe41-001) 145858243-145865558 protein_coding
ENSMUST00000111703 (Bhlhe41-002) 145863505-145865302 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004X9_0001ENSG00000123095ENST00000242728ENST00000394326ENST00000541271ENSG00000123096ENST00000242729ENST00000422622ENST00000534829ENST00000535504ENST00000538142ENST00000539019ENST00000540266ENST00000544231ENSG00000256234ENST00000540392ENSG00000256894ENST00000535914ENST00000545819ENSG00000278095ENST00000621404CIL_0004X9_0002ENSMUSG00000030255ENSMUST00000032383ENSMUST00000111701ENSMUST00000111702ENSMUSG00000030256ENSMUST00000032386ENSMUST00000111703
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004X9_0001ENSG00000123095ENST00000242728ENST00000541271ENSG00000123096ENST00000242729ENST00000422622ENSG00000256234ENST00000540392ENSG00000256894ENST00000535914ENST00000545819ENSG00000278095ENST00000621404CIL_0004X9_0002ENSMUSG00000030255ENSMUST00000032383ENSMUST00000111701ENSMUST00000111702ENSMUSG00000030256ENSMUST00000032386ENSMUST00000111703
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123095 ENST00000242728 4.127±0.00 6.369±0.00 1.131±0.00 18.336±11.88 12.235±7.44 3.033±1.63 3.456±0.00 1.794±1.77 2.037±1.95 3.290±0.25 9.592±0.00 5.755±3.20 4.724±2.42 5.154±1.92
ENST00000394326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.523±0.00 12.095±0.00 4.526±0.00
ENSG00000123096 ENST00000242729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.213±0.00 N/A N/A N/A
ENST00000422622 3.136±0.00 4.457±0.00 N/A N/A 3.566±0.00 4.457±0.00 1.396±0.00 0.087±0.00 0.127±0.00 1.059±0.00 N/A 3.631±0.00 N/A 2.126±0.00
ENST00000534829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256234 ENST00000540392 N/A N/A 0.797±0.00 N/A 0.142±0.00 N/A N/A N/A 0.054±0.00 0.679±0.00 N/A N/A N/A N/A
ENSG00000256894 ENST00000535914 0.131±0.00 0.084±0.00 N/A N/A 0.454±0.32 N/A N/A N/A N/A 0.526±0.00 N/A 0.677±0.00 0.160±0.00 0.141±0.00
ENST00000545819 0.086±0.00 0.441±0.00 0.889±0.00 1.507±0.00 0.637±0.14 0.100±0.00 0.346±0.18 0.441±0.00 0.165±0.00 0.487±0.00 0.312±0.00 0.434±0.22 N/A 0.653±0.00
ENSG00000278095 ENST00000621404 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.057±0.00 N/A 0.052±0.00 0.117±0.03 0.060±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030255 ENSMUST00000032383 11.558±2.02 8.903±0.70 19.829±3.04 0.794±0.37 10.197±1.72 3.924±0.15 35.686±1.44 1.712±0.19 0.214±0.09 7.240±0.19 16.349±3.40 10.098±2.79 0.351±0.37 0.531±0.14
ENSMUST00000111701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.07
ENSMUST00000111702 N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.04 N/A N/A N/A 0.350±0.12 N/A
ENSMUSG00000030256 ENSMUST00000032386 1.442±0.37 15.610±5.28 8.100±0.00 1.927±2.29 13.193±12.05 1.162±0.36 1.586±0.17 0.715±0.22 0.076±0.05 3.689±1.08 7.259±2.55 4.165±1.75 8.547±2.75 0.333±0.10
ENSMUST00000111703 N/A N/A N/A 17.660±0.00 N/A N/A N/A N/A 0.082±0.05 N/A N/A 5.670±2.16 30.180±17.98 1.015±0.00

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