C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic helix-loop-helix family, member e41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032386 Bhlhe41-001 ENSMUSG00000030256 10090 - 6:145858243-145865558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032386 1.442±0.37 15.610±5.28 8.100±0.00 1.927±2.29 13.193±12.05 1.162±0.36 1.586±0.17 0.715±0.22 0.076±0.05 3.689±1.08 7.259±2.55 4.165±1.75 8.547±2.75 0.333±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X8 CIL_0004X8_0002 CGP 6:145746748-145865558
CIL_0004X9 CIL_0004X9_0002 CGP 6:145858243-145965223

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001102 IPI RNA polymerase II activating transcription factor binding
GO:0001191 IDA RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription
GO:0003705 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0003714 TAS transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0007623 IEP circadian rhythm
GO:0010832 IDA negative regulation of myotube differentiation
GO:0010944 IDA negative regulation of transcription by competitive promoter binding
GO:0017053 TAS transcriptional repressor complex
GO:0032922 IMP circadian regulation of gene expression
GO:0042803 IPI protein homodimerization activity
GO:0042826 IDA histone deacetylase binding
GO:0043425 IPI bHLH transcription factor binding
GO:0043426 IDA MRF binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046982 IPI protein heterodimerization activity
GO:0070888 IDA E-box binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242728 BHLHE41-001 protein_coding Homo_sapiens 0 948
ENST00000394326 BHLHE41-003 retained_intron Homo_sapiens 0 350
ENST00000541271 BHLHE41-002 retained_intron Homo_sapiens 0 433

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