C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: single-pass membrane protein with coiled-coil domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030292 Smco2 10090 + 6:146850104-146871406 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032433 Smco2-201 146850104-146871404 protein_coding
  ENSMUST00000111634 Smco2-001 146850104-146871406 protein_coding
  ENSMUST00000128575 Smco2-003 146850157-146856182 processed_transcript
  ENSMUST00000148099 Smco2-002 146861800-146868166 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000032433ENSMUST00000111634ENSMUST00000128575ENSMUST00000148099
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000032433 0.021±0.01 0.066±0.00 0.006±0.00 N/A 0.019±0.00 0.079±0.03 0.033±0.01 0.017±0.01 0.049±0.03 0.093±0.07 0.012±0.00 78.214±16.57
ENSMUST00000111634 0.020±0.01 0.065±0.00 0.006±0.00 N/A 0.019±0.00 0.076±0.03 0.032±0.01 0.018±0.01 0.049±0.03 0.092±0.07 0.012±0.00 76.787±0.00
ENSMUST00000128575 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A
ENSMUST00000148099 0.135±0.06 N/A N/A 0.114±0.00 N/A 0.279±0.00 N/A N/A N/A 0.217±0.13 0.042±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056I CIL_00056I_0002 CGP 6:146796055-146871406
CIL_00056H CIL_00056H_0002 CGP 6:146850104-147032025

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165935 SMCO2 single-pass membrane protein with coiled-coil domains 2 protein_coding Homo_sapiens

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