C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00056I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000029153-ENSG00000165935 CGP 9606 12:27332854-27502185
GeneTranscriptPositionBiotype
ENSG00000029153 (ARNTL2)
aryl hydrocarbon receptor nuclear translocator-like 2 		ENST00000261178 (ARNTL2-006) 27333055-27420590 protein_coding
ENST00000266503 (ARNTL2-001) 27333055-27420894 protein_coding
ENST00000311001 (ARNTL2-005) 27333055-27420533 protein_coding
ENST00000395901 (ARNTL2-004) 27332920-27420533 protein_coding
ENST00000457040 (ARNTL2-008) 27368295-27420725 protein_coding
ENST00000539558 (ARNTL2-009) 27368317-27377503 processed_transcript
ENST00000542388 (ARNTL2-007) 27368336-27420590 protein_coding
ENST00000544915 (ARNTL2-002) 27332854-27425289 protein_coding
ENST00000546179 (ARNTL2-003) 27332920-27420549 protein_coding
ENSG00000165935 (SMCO2)
single-pass membrane protein with coiled-coil domains 2 		ENST00000298876 (SMCO2-002) 27466810-27502185 protein_coding
ENST00000416383 (SMCO2-201) 27466810-27502185 protein_coding
ENST00000535986 (SMCO2-001) 27470632-27502185 protein_coding
ENST00000538647 (SMCO2-005) 27474896-27495798 processed_transcript
ENST00000541168 (SMCO2-004) 27493836-27502147 retained_intron
ENST00000543991 (SMCO2-003) 27470622-27473117 retained_intron
ENSG00000257037 (RARSP1)
arginyl-tRNA synthetase pseudogene 1 		ENST00000542842 (RARSP1-001) 27496937-27498589 processed_pseudogene
CIL_00056I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040187-ENSMUSG00000030292 CGP 10090 6:146796055-146871406
GeneTranscriptPositionBiotype
ENSMUSG00000030292 (Smco2)
single-pass membrane protein with coiled-coil domains 2 		ENSMUST00000032433 (Smco2-201) 146850104-146871404 protein_coding
ENSMUST00000111634 (Smco2-001) 146850104-146871406 protein_coding
ENSMUST00000128575 (Smco2-003) 146850157-146856182 processed_transcript
ENSMUST00000148099 (Smco2-002) 146861800-146868166 protein_coding
ENSMUSG00000040187 (Arntl2)
aryl hydrocarbon receptor nuclear translocator-like 2 		ENSMUST00000080530 (Arntl2-201) 146805530-146832646 protein_coding
ENSMUST00000111636 (Arntl2-003) 146805530-146832646 protein_coding
ENSMUST00000111638 (Arntl2-005) 146805530-146832646 protein_coding
ENSMUST00000111639 (Arntl2-001) 146796065-146833529 protein_coding
ENSMUST00000123444 (Arntl2-002) 146796055-146805578 processed_transcript
ENSMUST00000129788 (Arntl2-004) 146805530-146832646 nonsense_mediated_decay
ENSMUST00000136594 (Arntl2-006) 146820431-146823154 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056I_0001ENSG00000029153ENST00000261178ENST00000266503ENST00000311001ENST00000395901ENST00000457040ENST00000539558ENST00000542388ENST00000544915ENST00000546179ENSG00000165935ENST00000298876ENST00000416383ENST00000535986ENST00000538647ENST00000541168ENST00000543991ENSG00000257037ENST00000542842CIL_00056I_0002ENSMUSG00000030292ENSMUST00000032433ENSMUST00000111634ENSMUST00000128575ENSMUST00000148099ENSMUSG00000040187ENSMUST00000080530ENSMUST00000111636ENSMUST00000111638ENSMUST00000111639ENSMUST00000123444ENSMUST00000129788ENSMUST00000136594
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056I_0001ENSG00000029153ENST00000261178ENST00000266503ENST00000311001ENST00000395901ENST00000542388ENST00000544915ENSG00000165935ENST00000298876ENST00000535986ENST00000538647ENST00000541168ENST00000543991ENSG00000257037ENST00000542842CIL_00056I_0002ENSMUSG00000030292ENSMUST00000032433ENSMUST00000111634ENSMUST00000128575ENSMUST00000148099ENSMUSG00000040187ENSMUST00000080530ENSMUST00000111636ENSMUST00000111638ENSMUST00000111639ENSMUST00000123444ENSMUST00000129788ENSMUST00000136594
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000029153 ENST00000261178 N/A N/A 0.154±0.00 0.883±0.00 0.558±0.16 0.710±0.00 0.303±0.00 N/A N/A N/A N/A 5.284±0.00 N/A N/A
ENST00000266503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.320±0.04 N/A
ENST00000311001 0.500±0.00 N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395901 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.313±0.00 N/A N/A N/A N/A
ENST00000457040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542388 N/A N/A N/A 1.314±0.00 N/A 0.634±0.00 0.120±0.00 0.434±0.00 0.681±0.07 0.467±0.00 0.334±0.00 3.032±2.55 1.037±0.31 0.982±0.02
ENST00000544915 0.782±0.00 N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.863±0.29 0.227±0.00 0.649±0.00
ENST00000546179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165935 ENST00000298876 N/A 0.143±0.00 N/A 0.066±0.00 N/A 0.015±0.00 0.143±0.00 N/A N/A 0.118±0.00 N/A 0.011±0.00 0.056±0.00 0.282±0.00
ENST00000416383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535986 N/A N/A N/A N/A N/A 0.193±0.00 N/A N/A 0.015±0.00 N/A N/A N/A 0.049±0.00 0.654±0.00
ENST00000538647 0.119±0.00 N/A N/A N/A 0.079±0.00 0.174±0.00 N/A N/A 0.165±0.00 N/A N/A 0.840±0.73 0.244±0.00 0.975±0.00
ENST00000541168 N/A 0.017±0.00 N/A 0.090±0.00 N/A N/A 0.022±0.00 N/A N/A N/A N/A 0.243±0.19 0.025±0.00 N/A
ENST00000543991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.02 N/A
ENSG00000257037 ENST00000542842 N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A N/A 0.053±0.00 0.043±0.00 0.041±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030292 ENSMUST00000032433 0.021±0.01 0.066±0.00 0.006±0.00 N/A 0.019±0.00 N/A 0.079±0.03 0.033±0.01 0.017±0.01 0.049±0.03 N/A 0.093±0.07 0.012±0.00 78.214±16.57
ENSMUST00000111634 0.020±0.01 0.065±0.00 0.006±0.00 N/A 0.019±0.00 N/A 0.076±0.03 0.032±0.01 0.018±0.01 0.049±0.03 N/A 0.092±0.07 0.012±0.00 76.787±0.00
ENSMUST00000128575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A
ENSMUST00000148099 0.135±0.06 N/A N/A 0.114±0.00 N/A N/A 0.279±0.00 N/A N/A N/A N/A 0.217±0.13 0.042±0.00 N/A
ENSMUSG00000040187 ENSMUST00000080530 N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 0.286±0.00 N/A N/A N/A N/A
ENSMUST00000111636 N/A N/A N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A
ENSMUST00000111638 N/A N/A N/A N/A N/A 0.400±0.10 N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A
ENSMUST00000111639 0.594±0.30 0.306±0.02 3.747±0.72 0.319±0.06 0.513±0.18 0.254±0.12 0.133±0.07 N/A 0.131±0.05 0.222±0.12 0.238±0.00 0.629±0.15 0.162±0.00 0.133±0.11
ENSMUST00000123444 7.182±0.00 1.891±0.33 N/A N/A N/A 2.259±0.57 N/A N/A 0.562±0.16 N/A N/A 7.026±4.17 N/A N/A
ENSMUST00000129788 0.949±0.00 N/A N/A 0.448±0.00 1.299±0.38 N/A N/A 0.220±0.00 0.198±0.13 0.215±0.06 0.246±0.11 0.354±0.16 0.204±0.13 0.344±0.04
ENSMUST00000136594 N/A N/A N/A 2.452±0.00 N/A 0.488±0.05 N/A N/A N/A N/A N/A 1.079±0.36 0.697±0.00 0.335±0.00

Loading