C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD9 antigen
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032492 Cd9-001 ENSMUSG00000030342 10090 - 6:125460266-125494791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032492
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032492 97.111±36.88 64.831±5.08 405.934±78.30 16.851±6.16 144.013±17.80 308.144±27.25 45.607±8.74 83.199±5.78 67.012±71.51 359.108±11.12 14.245±1.77 117.309±35.26 238.647±74.00 5.605±2.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006C4 CIL_0006C4_0002 CGP 6:125460266-125686679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005178 IEA integrin binding
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005886 TAS plasma membrane
GO:0005925 IEA focal adhesion
GO:0006928 ISS cellular component movement
GO:0007155 ISS cell adhesion
GO:0007342 IDA fusion of sperm to egg plasma membrane
GO:0007420 IEA brain development
GO:0008285 IDA negative regulation of cell proliferation
GO:0009414 IEA response to water deprivation
GO:0009897 IDA external side of plasma membrane
GO:0009986 IEA cell surface
GO:0014003 IEA oligodendrocyte development
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0030913 IDA paranodal junction assembly
GO:0031982 IEA vesicle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000135587 cd9a-002 protein_coding Danio_rerio 0.000000000000008 86
ENSDART00000019571 cd9a-001 protein_coding Danio_rerio 0.000000000000008 86
ENST00000009180 CD9-001 protein_coding Homo_sapiens 0 734
ENST00000382515 CD9-003 protein_coding Homo_sapiens 0 625
ENST00000382518 CD9-004 protein_coding Homo_sapiens 0 734
ENST00000382519 CD9-010 protein_coding Homo_sapiens 0 339
ENST00000481267 CD9-002 processed_transcript Homo_sapiens 0 625
ENST00000536586 CD9-011 protein_coding Homo_sapiens 0 520
ENST00000538418 CD9-008 processed_transcript Homo_sapiens 0 220
ENST00000538834 CD9-007 processed_transcript Homo_sapiens 0 340
ENST00000543916 CD9-005 processed_transcript Homo_sapiens 0 228
ENST00000546073 CD9-006 processed_transcript Homo_sapiens 0 339
ENST00000610354 CD9-201 protein_coding Homo_sapiens 0 728
ENST00000617871 CD9-202 protein_coding Homo_sapiens 0 721

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