C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L48
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030706 Mrpl48 10090 - 7:100545751-100608297 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064334 Mrpl48-201 100545756-100547620 protein_coding
  ENSMUST00000107053 Mrpl48-008 100549237-100574515 processed_transcript
  ENSMUST00000127253 Mrpl48-005 100597826-100607638 processed_transcript
  ENSMUST00000132888 Mrpl48-007 100559878-100583110 processed_transcript
  ENSMUST00000137777 Mrpl48-006 100550583-100591426 processed_transcript
  ENSMUST00000138448 Mrpl48-004 100565198-100607994 processed_transcript
  ENSMUST00000146003 Mrpl48-003 100552562-100608297 processed_transcript
  ENSMUST00000150042 Mrpl48-001 100545751-100583102 protein_coding
  ENSMUST00000152876 Mrpl48-009 100565183-100583075 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000107053ENSMUST00000146003ENSMUST00000150042
Transcript ID Adipose Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000107053 10.566±0.00 12.668±1.98 11.196±0.17 13.892±1.02 24.367±0.96 N/A 28.704±3.57 34.811±0.00 13.515±1.36
ENSMUST00000146003 N/A N/A N/A N/A N/A N/A N/A 104.772±0.00 N/A
ENSMUST00000150042 1.786±0.35 1.615±0.00 2.445±0.41 1.556±0.00 N/A 5.641±0.15 N/A N/A 2.229±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZZ CIL_0002ZZ_0002 CGP 7:100545751-100641268

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005739 IDA mitochondrion
GO:0005761 IEA mitochondrial ribosome
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035167 mrpl48 mitochondrial ribosomal protein L48 protein_coding Danio_rerio
ENSG00000175581 MRPL48 mitochondrial ribosomal protein L48 protein_coding Homo_sapiens

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