C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107053 Mrpl48-008 ENSMUSG00000030706 10090 - 7:100549237-100574515 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000107053
Transcript ID Adipose Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000107053 10.566±0.00 12.668±1.98 11.196±0.17 13.892±1.02 24.367±0.96 28.704±3.57 34.811±0.00 13.515±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZZ CIL_0002ZZ_0002 CGP 7:100545751-100641268

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310614 MRPL48-001 protein_coding Homo_sapiens 0 538
ENST00000314282 MRPL48-006 protein_coding Homo_sapiens 0 501
ENST00000398483 MRPL48-005 protein_coding Homo_sapiens 0 542
ENST00000411840 MRPL48-004 protein_coding Homo_sapiens 0 538
ENST00000445390 MRPL48P1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000497094 MRPL48-009 protein_coding Homo_sapiens 1e-38 163
ENST00000508278 MRPL48-002 nonsense_mediated_decay Homo_sapiens 0 538
ENST00000535277 MRPL48-010 protein_coding Homo_sapiens 0 237
ENST00000537007 MRPL48-012 protein_coding Homo_sapiens 0 202
ENST00000540162 MRPL48-007 nonsense_mediated_decay Homo_sapiens 0 538
ENST00000542303 MRPL48-011 protein_coding Homo_sapiens 0 213
ENST00000543058 MRPL48-013 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000543374 MRPL48-014 retained_intron Homo_sapiens 0 237
ENST00000544140 MRPL48-003 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000544819 MRPL48-008 nonsense_mediated_decay Homo_sapiens 0 542

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