C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146003 Mrpl48-003 ENSMUSG00000030706 10090 - 7:100552562-100608297 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000146003
Transcript ID Placenta
ENSMUST00000146003 104.772±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZZ CIL_0002ZZ_0002 CGP 7:100545751-100641268

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310614 MRPL48-001 protein_coding Homo_sapiens 0 388
ENST00000310653 RAB6A-001 protein_coding Homo_sapiens 0 316
ENST00000314282 MRPL48-006 protein_coding Homo_sapiens 0 292
ENST00000336083 RAB6A-002 protein_coding Homo_sapiens 0 316
ENST00000398483 MRPL48-005 protein_coding Homo_sapiens 0 329
ENST00000400470 RAB6A-010 protein_coding Homo_sapiens 0.00000000003 73
ENST00000410061 RAB6C-001 protein_coding Homo_sapiens 0 267
ENST00000411840 MRPL48-004 protein_coding Homo_sapiens 0 388
ENST00000412425 RAB6C-AS1-002 processed_transcript Homo_sapiens 3e-32 145
ENST00000484914 AC073869.1-001 transcribed_processed_pseudogene Homo_sapiens 5e-25 119
ENST00000497094 MRPL48-009 protein_coding Homo_sapiens 1e-38 163
ENST00000508278 MRPL48-002 nonsense_mediated_decay Homo_sapiens 0 329
ENST00000535277 MRPL48-010 protein_coding Homo_sapiens 0 292
ENST00000537007 MRPL48-012 protein_coding Homo_sapiens 0 202
ENST00000537446 RAB6A-011 nonsense_mediated_decay Homo_sapiens 2e-26 122
ENST00000540162 MRPL48-007 nonsense_mediated_decay Homo_sapiens 0 329
ENST00000540771 RAB6A-014 protein_coding Homo_sapiens 0 316
ENST00000541588 RAB6A-013 protein_coding Homo_sapiens 0 316
ENST00000541795 RAB6A-005 retained_intron Homo_sapiens 0 316
ENST00000543058 MRPL48-013 nonsense_mediated_decay Homo_sapiens 0 196
ENST00000543374 MRPL48-014 retained_intron Homo_sapiens 0 259
ENST00000544140 MRPL48-003 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000544819 MRPL48-008 nonsense_mediated_decay Homo_sapiens 0 329
ENST00000545625 RAB6A-012 nonsense_mediated_decay Homo_sapiens 1e-23 113
ENST00000623617 AC073869.1-002 processed_transcript Homo_sapiens 5e-25 119
ENST00000624615 RAB6C-AS1-003 TEC Homo_sapiens 0 267

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