C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 101
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030714 Ccdc101 10090 + 7:126649309-126672925 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032956 Ccdc101-001 126649309-126672925 protein_coding
  ENSMUST00000123274 Ccdc101-004 126649322-126664099 retained_intron
  ENSMUST00000123382 Ccdc101-008 126672031-126672779 processed_transcript
  ENSMUST00000123571 Ccdc101-003 126649309-126664004 processed_transcript
  ENSMUST00000126570 Ccdc101-002 126649312-126664950 processed_transcript
  ENSMUST00000129786 Ccdc101-007 126671577-126672392 retained_intron
  ENSMUST00000138794 Ccdc101-005 126663793-126664988 retained_intron
  ENSMUST00000152231 Ccdc101-006 126649347-126671881 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032956ENSMUST00000123274ENSMUST00000123382ENSMUST00000123571ENSMUST00000129786ENSMUST00000152231
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032956 10.073±0.99 11.240±2.11 7.600±0.00 15.053±1.31 11.938±0.78 20.815±1.15 4.892±1.05 7.487±1.21 10.088±3.01 11.485±0.81 8.612±2.03 16.669±3.82 7.363±2.82 139.390±15.28
ENSMUST00000123274 N/A N/A N/A 18.682±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.784±0.00 N/A
ENSMUST00000123571 N/A 18.261±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129786 N/A N/A N/A 8.249±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 97.289±0.00
ENSMUST00000152231 N/A N/A N/A 10.725±0.00 N/A N/A N/A N/A N/A N/A N/A 23.195±0.00 8.787±2.09 104.863±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WL CIL_0004WL_0002 CGP 7:126623249-126672925
CIL_0004WI CIL_0004WI_0002 CGP 7:126649309-126676432

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005671 ISS Ada2/Gcn5/Ada3 transcription activator complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0035064 ISS methylated histone binding
GO:0043966 IEA histone H3 acetylation
GO:0070461 ISS SAGA-type complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002339 ccdc101 coiled-coil domain containing 101 protein_coding Danio_rerio
ENSG00000176476 CCDC101 coiled-coil domain containing 101 protein_coding Homo_sapiens

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