C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004WL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176046-ENSG00000176476 CGP 9606 16:28532708-28591790
GeneTranscriptPositionBiotype
ENSG00000176046 (NUPR1)
nuclear protein, transcriptional regulator, 1 		ENST00000324873 (NUPR1-001) 28532708-28539174 protein_coding
ENST00000395641 (NUPR1-002) 28537537-28539008 protein_coding
ENST00000567646 (NUPR1-003) 28537507-28538951 nonsense_mediated_decay
ENSG00000176476 (CCDC101)
coiled-coil domain containing 101 		ENST00000317058 (CCDC101-001) 28553926-28591790 protein_coding
ENST00000564023 (CCDC101-007) 28590385-28591788 protein_coding
ENST00000564682 (CCDC101-002) 28553915-28585403 retained_intron
ENST00000565945 (CCDC101-006) 28590600-28591788 retained_intron
ENST00000567447 (CCDC101-005) 28590117-28591790 retained_intron
ENST00000567564 (CCDC101-004) 28553972-28590441 nonsense_mediated_decay
ENST00000569581 (CCDC101-003) 28553920-28589420 retained_intron
ENSG00000271495 (RP11-666O2.1)
 ENST00000604296 (RP11-666O2.1-001) 28548331-28548658 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0004WL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030717-ENSMUSG00000030714 CGP 10090 7:126623249-126672925
GeneTranscriptPositionBiotype
ENSMUSG00000030711 (Sult1a1)
sulfotransferase family 1A, phenol-preferring, member 1 		ENSMUST00000106371 (Sult1a1-002) 126672870-126676357 protein_coding
ENSMUST00000106372 (Sult1a1-201) 126672871-126676357 protein_coding
ENSMUST00000106373 (Sult1a1-001) 126672865-126676432 protein_coding
ENSMUST00000155419 (Sult1a1-003) 126674268-126676375 protein_coding
ENSMUSG00000030714 (Ccdc101)
coiled-coil domain containing 101 		ENSMUST00000032956 (Ccdc101-001) 126649309-126672925 protein_coding
ENSMUST00000123274 (Ccdc101-004) 126649322-126664099 retained_intron
ENSMUST00000123382 (Ccdc101-008) 126672031-126672779 processed_transcript
ENSMUST00000123571 (Ccdc101-003) 126649309-126664004 processed_transcript
ENSMUST00000126570 (Ccdc101-002) 126649312-126664950 processed_transcript
ENSMUST00000129786 (Ccdc101-007) 126671577-126672392 retained_intron
ENSMUST00000138794 (Ccdc101-005) 126663793-126664988 retained_intron
ENSMUST00000152231 (Ccdc101-006) 126649347-126671881 retained_intron
ENSMUSG00000030717 (Nupr1)
nuclear protein transcription regulator 1 		ENSMUST00000032961 (Nupr1-001) 126623249-126625676 protein_coding
ENSMUST00000131174 (Nupr1-003) 126623252-126627010 retained_intron
ENSMUST00000151105 (Nupr1-002) 126624948-126626016 processed_transcript
ENSMUST00000187609 (Nupr1-006) 126623442-126625475 processed_transcript
ENSMUST00000191192 (Nupr1-005) 126623278-126625344 nonsense_mediated_decay
ENSMUST00000191413 (Nupr1-004) 126624948-126630861 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004WL_0001ENSG00000176046ENST00000324873ENST00000395641ENST00000567646ENSG00000176476ENST00000317058ENST00000564023ENST00000564682ENST00000565945ENST00000567447ENST00000567564ENST00000569581ENSG00000271495ENST00000604296CIL_0004WL_0002ENSMUSG00000030711ENSMUST00000106371ENSMUST00000106372ENSMUST00000106373ENSMUST00000155419ENSMUSG00000030714ENSMUST00000032956ENSMUST00000123274ENSMUST00000123382ENSMUST00000123571ENSMUST00000126570ENSMUST00000129786ENSMUST00000138794ENSMUST00000152231ENSMUSG00000030717ENSMUST00000032961ENSMUST00000131174ENSMUST00000151105ENSMUST00000187609ENSMUST00000191192ENSMUST00000191413
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004WL_0001ENSG00000176046ENST00000324873ENST00000395641ENST00000567646ENSG00000176476ENST00000317058ENST00000564023ENST00000564682ENST00000567447ENST00000567564ENST00000569581ENSG00000271495ENST00000604296CIL_0004WL_0002ENSMUSG00000030711ENSMUST00000106371ENSMUST00000106372ENSMUST00000106373ENSMUST00000155419ENSMUSG00000030714ENSMUST00000032956ENSMUST00000123274ENSMUST00000123382ENSMUST00000123571ENSMUST00000129786ENSMUST00000152231ENSMUSG00000030717ENSMUST00000032961ENSMUST00000131174ENSMUST00000151105ENSMUST00000187609ENSMUST00000191192ENSMUST00000191413
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176046 ENST00000324873 5.605±0.00 4.931±0.00 0.246±0.00 1.023±0.93 2.855±2.20 5.826±5.30 0.625±0.51 3.302±2.25 1.182±0.11 2.440±1.47 2.968±2.23 3.473±3.38 1.782±0.77 3.309±2.43
ENST00000395641 130.942±0.00 103.811±0.00 2.549±0.00 26.610±0.00 65.335±59.02 140.861±136.10 6.748±5.71 56.084±41.54 22.410±0.00 33.794±28.97 26.921±0.00 19.799±14.38 44.368±0.00 79.232±60.61
ENST00000567646 25.183±0.00 24.114±0.00 N/A N/A 2.328±0.00 N/A 8.373±0.00 N/A 3.996±0.00 N/A 30.184±0.00 6.750±0.00 27.661±12.68 54.989±0.00
ENSG00000176476 ENST00000317058 8.150±0.00 12.762±0.00 0.242±0.00 3.152±0.92 6.301±4.07 10.637±9.10 4.105±2.29 7.497±0.96 5.358±2.57 7.519±0.00 26.786±23.77 34.793±6.46 6.536±3.27 20.846±11.39
ENST00000564023 4.641±0.00 7.834±0.00 N/A 2.353±0.00 6.429±0.00 7.654±0.00 N/A N/A N/A 4.619±0.00 9.167±0.00 N/A N/A 21.562±0.00
ENST00000564682 N/A N/A N/A N/A 0.893±0.00 0.418±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567447 N/A 5.511±0.00 N/A N/A 3.106±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567564 N/A N/A N/A N/A N/A N/A N/A N/A 2.048±0.00 1.755±0.00 N/A 12.967±0.00 15.552±0.00 79.022±0.00
ENST00000569581 N/A N/A 0.906±0.00 0.437±0.00 N/A N/A N/A N/A N/A 1.133±0.00 N/A 3.855±0.00 N/A N/A
ENSG00000271495 ENST00000604296 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030711 ENSMUST00000106371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.554±0.00 4.070±0.00 N/A N/A
ENSMUST00000106372 N/A N/A N/A N/A N/A N/A 2.905±0.00 N/A 19.142±0.00 N/A 4.096±1.01 4.437±0.00 N/A N/A
ENSMUST00000106373 60.871±35.02 11.269±3.43 11.684±0.94 N/A 30.640±8.49 68.942±13.29 9.302±1.69 7.209±0.70 109.818±79.06 16.491±3.49 8.952±1.64 13.359±4.37 8.328±4.50 N/A
ENSMUST00000155419 77.828±43.15 21.413±4.16 N/A N/A 52.204±7.23 106.034±17.48 11.590±2.36 9.369±1.64 158.429±5.73 23.131±6.76 N/A 26.534±4.55 N/A N/A
ENSMUSG00000030714 ENSMUST00000032956 10.073±0.99 11.240±2.11 7.600±0.00 15.053±1.31 11.938±0.78 20.815±1.15 4.892±1.05 7.487±1.21 10.088±3.01 11.485±0.81 8.612±2.03 16.669±3.82 7.363±2.82 139.390±15.28
ENSMUST00000123274 N/A N/A N/A 18.682±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.784±0.00 N/A
ENSMUST00000123571 N/A 18.261±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129786 N/A N/A N/A 8.249±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 97.289±0.00
ENSMUST00000138794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152231 N/A N/A N/A 10.725±0.00 N/A N/A N/A N/A N/A N/A N/A 23.195±0.00 8.787±2.09 104.863±0.00
ENSMUSG00000030717 ENSMUST00000032961 34.887±16.54 1.815±0.63 27.165±2.68 2.884±2.68 18.935±2.15 80.817±12.44 3.463±1.60 14.253±1.51 1.544±1.59 31.786±6.85 4.451±1.12 97.188±48.45 5.897±4.92 0.982±0.32
ENSMUST00000131174 2.496±0.11 0.635±0.23 1.365±0.00 0.058±0.00 6.321±1.86 9.071±1.53 0.507±0.18 0.934±0.30 0.199±0.13 3.455±0.79 N/A 7.320±1.36 0.067±0.01 0.075±0.03
ENSMUST00000151105 N/A N/A N/A N/A N/A N/A N/A N/A 0.283±0.11 N/A N/A N/A N/A N/A
ENSMUST00000187609 N/A N/A N/A N/A N/A N/A N/A N/A 0.263±0.12 N/A N/A 17.899±4.91 N/A N/A
ENSMUST00000191192 N/A N/A N/A 3.490±3.16 N/A N/A 1.143±0.00 N/A 0.960±0.72 N/A 2.189±0.73 130.722±33.35 5.052±3.00 2.488±0.00
ENSMUST00000191413 N/A N/A N/A 12.327±0.00 N/A N/A N/A N/A N/A N/A N/A 197.745±0.00 12.316±0.00 N/A

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