C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 101
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176476 CCDC101 9606 + 16:28553915-28591790 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317058 CCDC101-001 28553926-28591790 protein_coding
  ENST00000564023 CCDC101-007 28590385-28591788 protein_coding
  ENST00000564682 CCDC101-002 28553915-28585403 retained_intron
  ENST00000565945 CCDC101-006 28590600-28591788 retained_intron
  ENST00000567447 CCDC101-005 28590117-28591790 retained_intron
  ENST00000567564 CCDC101-004 28553972-28590441 nonsense_mediated_decay
  ENST00000569581 CCDC101-003 28553920-28589420 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317058ENST00000564023ENST00000564682ENST00000567447ENST00000567564ENST00000569581
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317058 8.150±0.00 12.762±0.00 0.242±0.00 3.152±0.92 6.301±4.07 10.637±9.10 4.105±2.29 7.497±0.96 5.358±2.57 7.519±0.00 26.786±23.77 34.793±6.46 6.536±3.27 20.846±11.39
ENST00000564023 4.641±0.00 7.834±0.00 N/A 2.353±0.00 6.429±0.00 7.654±0.00 N/A N/A N/A 4.619±0.00 9.167±0.00 N/A N/A 21.562±0.00
ENST00000564682 N/A N/A N/A N/A 0.893±0.00 0.418±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567447 N/A 5.511±0.00 N/A N/A 3.106±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567564 N/A N/A N/A N/A N/A N/A N/A N/A 2.048±0.00 1.755±0.00 N/A 12.967±0.00 15.552±0.00 79.022±0.00
ENST00000569581 N/A N/A 0.906±0.00 0.437±0.00 N/A N/A N/A N/A N/A 1.133±0.00 N/A 3.855±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WL CIL_0004WL_0001 CGP 16:28532708-28591790
CIL_0004WI CIL_0004WI_0001 CGP 16:28553915-28597109

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035064 IDA methylated histone binding
GO:0043966 IDA histone H3 acetylation
GO:0070461 IDA SAGA-type complex
GO:0071169 TAS establishment of protein localization to chromatin

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002339 ccdc101 coiled-coil domain containing 101 protein_coding Danio_rerio
ENSMUSG00000030714 Ccdc101 coiled-coil domain containing 101 protein_coding Mus_musculus

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